Coexpression cluster: Cluster_130 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043603 amide metabolic process 14.0% (7/50) 4.03 0.0 3e-06
GO:0043232 intracellular non-membrane-bounded organelle 14.0% (7/50) 4.04 0.0 3e-06
GO:0043228 non-membrane-bounded organelle 14.0% (7/50) 4.04 0.0 3e-06
GO:0005198 structural molecule activity 14.0% (7/50) 4.09 0.0 3e-06
GO:0006518 peptide metabolic process 14.0% (7/50) 4.1 0.0 3e-06
GO:0043043 peptide biosynthetic process 14.0% (7/50) 4.17 0.0 4e-06
GO:0043604 amide biosynthetic process 14.0% (7/50) 4.12 0.0 4e-06
GO:0043226 organelle 16.0% (8/50) 3.57 0.0 4e-06
GO:0043229 intracellular organelle 16.0% (8/50) 3.57 0.0 4e-06
GO:0003735 structural constituent of ribosome 14.0% (7/50) 4.17 0.0 4e-06
GO:0006412 translation 14.0% (7/50) 4.19 0.0 5e-06
GO:0005852 eukaryotic translation initiation factor 3 complex 6.0% (3/50) 8.22 0.0 7e-06
GO:0005840 ribosome 14.0% (7/50) 4.23 0.0 1.4e-05
GO:1901566 organonitrogen compound biosynthetic process 14.0% (7/50) 3.59 2e-06 1.9e-05
GO:0097159 organic cyclic compound binding 38.0% (19/50) 1.65 3e-06 2.4e-05
GO:1901363 heterocyclic compound binding 38.0% (19/50) 1.65 3e-06 2.4e-05
GO:0009059 macromolecule biosynthetic process 14.0% (7/50) 3.53 2e-06 2.4e-05
GO:0044271 cellular nitrogen compound biosynthetic process 14.0% (7/50) 3.31 6e-06 5.2e-05
GO:0003743 translation initiation factor activity 6.0% (3/50) 6.28 8e-06 5.9e-05
GO:0003674 molecular_function 60.0% (30/50) 1.02 8e-06 6e-05
GO:0005575 cellular_component 24.0% (12/50) 2.11 1.4e-05 9.9e-05
GO:0110165 cellular anatomical entity 22.0% (11/50) 2.23 1.6e-05 0.000112
GO:0035639 purine ribonucleoside triphosphate binding 20.0% (10/50) 2.37 1.8e-05 0.000115
GO:0034641 cellular nitrogen compound metabolic process 18.0% (9/50) 2.54 2e-05 0.000126
GO:0032555 purine ribonucleotide binding 20.0% (10/50) 2.3 2.8e-05 0.00017
GO:0044249 cellular biosynthetic process 14.0% (7/50) 2.94 3.3e-05 0.000176
GO:0032553 ribonucleotide binding 20.0% (10/50) 2.28 3.1e-05 0.000178
GO:0097367 carbohydrate derivative binding 20.0% (10/50) 2.27 3.2e-05 0.00018
GO:0045182 translation regulator activity 6.0% (3/50) 5.54 3.8e-05 0.000182
GO:0090079 translation regulator activity, nucleic acid binding 6.0% (3/50) 5.54 3.8e-05 0.000182
GO:0008135 translation factor activity, RNA binding 6.0% (3/50) 5.54 3.8e-05 0.000182
GO:0017076 purine nucleotide binding 20.0% (10/50) 2.21 4.8e-05 0.000218
GO:0005488 binding 44.0% (22/50) 1.21 4.8e-05 0.000223
GO:1901576 organic substance biosynthetic process 14.0% (7/50) 2.79 6.3e-05 0.000277
GO:0043168 anion binding 20.0% (10/50) 2.15 6.8e-05 0.000292
GO:0000166 nucleotide binding 20.0% (10/50) 2.13 7.2e-05 0.000293
GO:1901265 nucleoside phosphate binding 20.0% (10/50) 2.13 7.2e-05 0.000293
GO:0036094 small molecule binding 20.0% (10/50) 2.08 9.8e-05 0.000386
GO:0009058 biosynthetic process 14.0% (7/50) 2.64 0.000124 0.000476
GO:0003676 nucleic acid binding 24.0% (12/50) 1.77 0.000143 0.000537
GO:0003924 GTPase activity 6.0% (3/50) 4.21 0.000581 0.002126
GO:0044237 cellular metabolic process 20.0% (10/50) 1.64 0.001119 0.003995
GO:0005524 ATP binding 14.0% (7/50) 2.04 0.001432 0.004996
GO:0032561 guanyl ribonucleotide binding 6.0% (3/50) 3.71 0.001586 0.005286
GO:0005525 GTP binding 6.0% (3/50) 3.71 0.001586 0.005286
GO:0019001 guanyl nucleotide binding 6.0% (3/50) 3.67 0.001702 0.005548
GO:0032559 adenyl ribonucleotide binding 14.0% (7/50) 1.95 0.00204 0.00651
GO:0009987 cellular process 24.0% (12/50) 1.3 0.002512 0.00785
GO:0030554 adenyl nucleotide binding 14.0% (7/50) 1.86 0.002964 0.008891
GO:0005737 cytoplasm 4.0% (2/50) 4.64 0.002953 0.009038
GO:0003723 RNA binding 8.0% (4/50) 2.73 0.003111 0.00915
GO:0031369 translation initiation factor binding 2.0% (1/50) 7.86 0.004295 0.012389
GO:0017111 ribonucleoside triphosphate phosphatase activity 6.0% (3/50) 3.15 0.004689 0.013269
GO:0016462 pyrophosphatase activity 6.0% (3/50) 3.07 0.005504 0.015288
GO:0016817 hydrolase activity, acting on acid anhydrides 6.0% (3/50) 3.03 0.006006 0.016086
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 6.0% (3/50) 3.03 0.005941 0.016204
GO:1901564 organonitrogen compound metabolic process 16.0% (8/50) 1.49 0.006771 0.017817
GO:0008150 biological_process 30.0% (15/50) 0.95 0.007067 0.017967
GO:0043170 macromolecule metabolic process 18.0% (9/50) 1.37 0.007013 0.018137
GO:0043167 ion binding 20.0% (10/50) 1.25 0.007907 0.019766
GO:0008152 metabolic process 22.0% (11/50) 1.14 0.009086 0.022342
GO:0019538 protein metabolic process 14.0% (7/50) 1.51 0.01067 0.025813
GO:0043565 sequence-specific DNA binding 4.0% (2/50) 3.63 0.011518 0.026996
GO:0006807 nitrogen compound metabolic process 18.0% (9/50) 1.26 0.011513 0.027411
GO:0044238 primary metabolic process 20.0% (10/50) 1.16 0.012078 0.027873
GO:0071704 organic substance metabolic process 20.0% (10/50) 1.11 0.014998 0.034086
GO:0032991 protein-containing complex 6.0% (3/50) 2.53 0.015279 0.034207
GO:0034728 nucleosome organization 2.0% (1/50) 5.54 0.021295 0.046294
GO:0006334 nucleosome assembly 2.0% (1/50) 5.54 0.021295 0.046294
GO:0009982 pseudouridine synthase activity 2.0% (1/50) 5.45 0.022699 0.046642
GO:0005741 mitochondrial outer membrane 2.0% (1/50) 5.45 0.022699 0.046642
GO:0065004 protein-DNA complex assembly 2.0% (1/50) 5.45 0.022699 0.046642
GO:0031968 organelle outer membrane 2.0% (1/50) 5.45 0.022699 0.046642
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_13 0.025 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_20 0.037 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_37 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_79 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_94 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_138 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_151 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_186 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_201 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_235 0.022 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_236 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_239 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_279 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_4 0.021 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_9 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_28 0.038 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_51 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_68 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_134 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_179 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_197 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_218 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_1 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_3 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_5 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_7 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_9 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_15 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_19 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_21 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_28 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_31 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_35 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_38 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_45 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_47 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_49 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_61 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_63 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_65 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_73 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_74 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_78 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_79 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_80 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_81 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_84 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_88 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_94 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_95 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_96 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_98 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_106 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_112 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_114 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_115 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_118 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_131 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_146 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_159 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_160 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_170 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_176 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_193 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_232 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_356 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_406 0.018 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_58 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_84 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_100 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_145 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_150 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_165 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_169 0.033 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_181 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (50) (download table)

InterPro Domains

GO Terms

Family Terms