Coexpression cluster: Cluster_61 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0004672 protein kinase activity 24.37% (29/119) 3.45 0.0 0.0
GO:0016310 phosphorylation 24.37% (29/119) 3.47 0.0 0.0
GO:0006468 protein phosphorylation 24.37% (29/119) 3.48 0.0 0.0
GO:0016773 phosphotransferase activity, alcohol group as acceptor 24.37% (29/119) 3.37 0.0 0.0
GO:0016301 kinase activity 24.37% (29/119) 3.35 0.0 0.0
GO:0006793 phosphorus metabolic process 24.37% (29/119) 3.22 0.0 0.0
GO:0006796 phosphate-containing compound metabolic process 24.37% (29/119) 3.22 0.0 0.0
GO:0036211 protein modification process 24.37% (29/119) 3.19 0.0 0.0
GO:0016772 transferase activity, transferring phosphorus-containing groups 24.37% (29/119) 3.14 0.0 0.0
GO:0043412 macromolecule modification 24.37% (29/119) 3.12 0.0 0.0
GO:0016740 transferase activity 28.57% (34/119) 2.56 0.0 0.0
GO:0140096 catalytic activity, acting on a protein 26.05% (31/119) 2.63 0.0 0.0
GO:0003674 molecular_function 63.87% (76/119) 1.11 0.0 0.0
GO:0019538 protein metabolic process 26.05% (31/119) 2.41 0.0 0.0
GO:0005488 binding 48.74% (58/119) 1.35 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 26.05% (31/119) 2.2 0.0 0.0
GO:0036094 small molecule binding 23.53% (28/119) 2.32 0.0 0.0
GO:0043168 anion binding 22.69% (27/119) 2.33 0.0 0.0
GO:0000166 nucleotide binding 22.69% (27/119) 2.32 0.0 0.0
GO:1901265 nucleoside phosphate binding 22.69% (27/119) 2.32 0.0 0.0
GO:0017076 purine nucleotide binding 21.85% (26/119) 2.33 0.0 0.0
GO:0032555 purine ribonucleotide binding 21.01% (25/119) 2.37 0.0 0.0
GO:0032553 ribonucleotide binding 21.01% (25/119) 2.35 0.0 0.0
GO:0097367 carbohydrate derivative binding 21.01% (25/119) 2.34 0.0 0.0
GO:0043170 macromolecule metabolic process 26.89% (32/119) 1.95 0.0 0.0
GO:0032559 adenyl ribonucleotide binding 19.33% (23/119) 2.42 0.0 0.0
GO:0044237 cellular metabolic process 25.21% (30/119) 1.97 0.0 0.0
GO:0006807 nitrogen compound metabolic process 26.89% (32/119) 1.84 0.0 0.0
GO:0030554 adenyl nucleotide binding 19.33% (23/119) 2.32 0.0 0.0
GO:0035639 purine ribonucleoside triphosphate binding 18.49% (22/119) 2.26 0.0 0.0
GO:0043167 ion binding 26.89% (32/119) 1.68 0.0 0.0
GO:0044238 primary metabolic process 27.73% (33/119) 1.63 0.0 0.0
GO:0097159 organic cyclic compound binding 32.77% (39/119) 1.43 0.0 0.0
GO:1901363 heterocyclic compound binding 32.77% (39/119) 1.43 0.0 0.0
GO:0003824 catalytic activity 37.82% (45/119) 1.28 0.0 0.0
GO:0005524 ATP binding 16.81% (20/119) 2.31 0.0 0.0
GO:0009987 cellular process 28.57% (34/119) 1.56 0.0 0.0
GO:0071704 organic substance metabolic process 27.73% (33/119) 1.58 0.0 0.0
GO:0008150 biological_process 36.97% (44/119) 1.26 0.0 0.0
GO:0008152 metabolic process 28.57% (34/119) 1.52 0.0 0.0
GO:0005515 protein binding 18.49% (22/119) 1.91 0.0 0.0
GO:0043565 sequence-specific DNA binding 3.36% (4/119) 3.37 0.000623 0.00264
GO:2001141 regulation of RNA biosynthetic process 5.88% (7/119) 2.17 0.001007 0.004075
GO:0006355 regulation of DNA-templated transcription 5.88% (7/119) 2.17 0.001007 0.004075
GO:0051252 regulation of RNA metabolic process 5.88% (7/119) 2.14 0.0011 0.00435
GO:0019219 regulation of nucleobase-containing compound metabolic process 5.88% (7/119) 2.11 0.001273 0.004927
GO:0017111 ribonucleoside triphosphate phosphatase activity 4.2% (5/119) 2.64 0.001304 0.004937
GO:0031326 regulation of cellular biosynthetic process 5.88% (7/119) 2.03 0.001762 0.0056
GO:0010468 regulation of gene expression 5.88% (7/119) 2.03 0.001762 0.0056
GO:0009889 regulation of biosynthetic process 5.88% (7/119) 2.03 0.001762 0.0056
GO:0010556 regulation of macromolecule biosynthetic process 5.88% (7/119) 2.03 0.001762 0.0056
GO:0065007 biological regulation 6.72% (8/119) 1.83 0.001949 0.005782
GO:0043531 ADP binding 2.52% (3/119) 3.61 0.001946 0.005871
GO:0016817 hydrolase activity, acting on acid anhydrides 4.2% (5/119) 2.51 0.001929 0.005921
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 4.2% (5/119) 2.52 0.001897 0.005924
GO:0050789 regulation of biological process 6.72% (8/119) 1.86 0.001756 0.006009
GO:0051171 regulation of nitrogen compound metabolic process 5.88% (7/119) 2.03 0.001723 0.006012
GO:0080090 regulation of primary metabolic process 5.88% (7/119) 2.03 0.001723 0.006012
GO:0050794 regulation of cellular process 6.72% (8/119) 1.87 0.001641 0.006084
GO:0016462 pyrophosphatase activity 4.2% (5/119) 2.56 0.001681 0.006106
GO:0019222 regulation of metabolic process 5.88% (7/119) 1.96 0.002287 0.006462
GO:0060255 regulation of macromolecule metabolic process 5.88% (7/119) 1.96 0.002263 0.006497
GO:0031323 regulation of cellular metabolic process 5.88% (7/119) 1.96 0.002263 0.006497
GO:0045944 positive regulation of transcription by RNA polymerase II 0.84% (1/119) 8.2 0.003412 0.008932
GO:0032784 regulation of DNA-templated transcription elongation 0.84% (1/119) 8.2 0.003412 0.008932
GO:0032786 positive regulation of DNA-templated transcription, elongation 0.84% (1/119) 8.2 0.003412 0.008932
GO:0032968 positive regulation of transcription elongation by RNA polymerase II 0.84% (1/119) 8.2 0.003412 0.008932
GO:0034243 regulation of transcription elongation by RNA polymerase II 0.84% (1/119) 8.2 0.003412 0.008932
GO:0003677 DNA binding 6.72% (8/119) 1.58 0.005468 0.014107
GO:0003924 GTPase activity 2.52% (3/119) 2.96 0.006906 0.017072
GO:0004555 alpha,alpha-trehalase activity 0.84% (1/119) 7.2 0.006813 0.01708
GO:0015927 trehalase activity 0.84% (1/119) 7.2 0.006813 0.01708
GO:0051254 positive regulation of RNA metabolic process 0.84% (1/119) 6.2 0.01358 0.031392
GO:0031683 G-protein beta/gamma-subunit complex binding 0.84% (1/119) 6.2 0.01358 0.031392
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 0.84% (1/119) 6.2 0.01358 0.031392
GO:0045893 positive regulation of DNA-templated transcription 0.84% (1/119) 6.2 0.01358 0.031392
GO:1902680 positive regulation of RNA biosynthetic process 0.84% (1/119) 6.2 0.01358 0.031392
GO:0030247 polysaccharide binding 1.68% (2/119) 3.39 0.015768 0.035984
GO:0019001 guanyl nucleotide binding 2.52% (3/119) 2.42 0.018791 0.042338
GO:0010557 positive regulation of macromolecule biosynthetic process 0.84% (1/119) 5.39 0.023644 0.048376
GO:0010604 positive regulation of macromolecule metabolic process 0.84% (1/119) 5.39 0.023644 0.048376
GO:0009891 positive regulation of biosynthetic process 0.84% (1/119) 5.39 0.023644 0.048376
GO:0006367 transcription initiation at RNA polymerase II promoter 0.84% (1/119) 5.39 0.023644 0.048376
GO:0051173 positive regulation of nitrogen compound metabolic process 0.84% (1/119) 5.39 0.023644 0.048376
GO:0031328 positive regulation of cellular biosynthetic process 0.84% (1/119) 5.39 0.023644 0.048376
GO:0031325 positive regulation of cellular metabolic process 0.84% (1/119) 5.39 0.023644 0.048376
GO:0009893 positive regulation of metabolic process 0.84% (1/119) 5.39 0.023644 0.048376
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_156 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_235 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_261 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_163 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_183 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_209 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_5 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_10 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_18 0.018 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_45 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_52 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_54 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_76 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_99 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_118 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_121 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_130 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_133 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_141 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_168 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_212 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_230 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_234 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_269 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_440 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_613 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_677 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_165 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (119) (download table)

InterPro Domains

GO Terms

Family Terms