- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
| ID | Label | % in cluster | Enrichment log2 | p-value | Corrected p-value |
|---|---|---|---|---|---|
| GO:0003723 | RNA binding | 11.3% (13/115) | 3.23 | 0.0 | 0.0 |
| GO:0003674 | molecular_function | 53.04% (61/115) | 0.84 | 0.0 | 1.6e-05 |
| GO:0005488 | binding | 38.26% (44/115) | 1.0 | 1e-06 | 0.000114 |
| GO:0097159 | organic cyclic compound binding | 26.09% (30/115) | 1.1 | 3.3e-05 | 0.001519 |
| GO:1901363 | heterocyclic compound binding | 26.09% (30/115) | 1.1 | 3.3e-05 | 0.001519 |
| GO:0009308 | amine metabolic process | 2.61% (3/115) | 5.66 | 2.7e-05 | 0.001883 |
| GO:0003676 | nucleic acid binding | 18.26% (21/115) | 1.37 | 5e-05 | 0.00196 |
| GO:0008131 | primary amine oxidase activity | 1.74% (2/115) | 6.66 | 0.00016 | 0.00488 |
| GO:0016641 | oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor | 1.74% (2/115) | 6.66 | 0.00016 | 0.00488 |
| GO:0006644 | phospholipid metabolic process | 2.61% (3/115) | 4.58 | 0.000271 | 0.007421 |
| GO:0045182 | translation regulator activity | 2.61% (3/115) | 4.34 | 0.000448 | 0.008768 |
| GO:0090079 | translation regulator activity, nucleic acid binding | 2.61% (3/115) | 4.34 | 0.000448 | 0.008768 |
| GO:0008135 | translation factor activity, RNA binding | 2.61% (3/115) | 4.34 | 0.000448 | 0.008768 |
| GO:0044237 | cellular metabolic process | 15.65% (18/115) | 1.29 | 0.000384 | 0.009563 |
| GO:0016307 | obsolete phosphatidylinositol phosphate kinase activity | 1.74% (2/115) | 5.66 | 0.000696 | 0.011923 |
| GO:0005096 | GTPase activator activity | 1.74% (2/115) | 5.66 | 0.000696 | 0.011923 |
| GO:1901564 | organonitrogen compound metabolic process | 13.91% (16/115) | 1.29 | 0.000793 | 0.012781 |
| GO:0008152 | metabolic process | 20.0% (23/115) | 1.0 | 0.000894 | 0.013614 |
| GO:0008047 | enzyme activator activity | 1.74% (2/115) | 5.34 | 0.0011 | 0.01587 |
| GO:0048038 | quinone binding | 1.74% (2/115) | 5.24 | 0.001255 | 0.017193 |
| GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | 1.74% (2/115) | 5.07 | 0.001593 | 0.020788 |
| GO:0006413 | translational initiation | 1.74% (2/115) | 5.0 | 0.001777 | 0.02213 |
| GO:0140677 | molecular function activator activity | 1.74% (2/115) | 4.92 | 0.00197 | 0.023469 |
| GO:0009113 | purine nucleobase biosynthetic process | 0.87% (1/115) | 8.24 | 0.003297 | 0.023777 |
| GO:0016559 | peroxisome fission | 0.87% (1/115) | 8.24 | 0.003297 | 0.023777 |
| GO:0006596 | polyamine biosynthetic process | 0.87% (1/115) | 8.24 | 0.003297 | 0.023777 |
| GO:0016813 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines | 0.87% (1/115) | 8.24 | 0.003297 | 0.023777 |
| GO:0048285 | organelle fission | 0.87% (1/115) | 8.24 | 0.003297 | 0.023777 |
| GO:0009446 | putrescine biosynthetic process | 0.87% (1/115) | 8.24 | 0.003297 | 0.023777 |
| GO:0006595 | polyamine metabolic process | 0.87% (1/115) | 8.24 | 0.003297 | 0.023777 |
| GO:0004637 | phosphoribosylamine-glycine ligase activity | 0.87% (1/115) | 8.24 | 0.003297 | 0.023777 |
| GO:0006144 | purine nucleobase metabolic process | 0.87% (1/115) | 8.24 | 0.003297 | 0.023777 |
| GO:0004668 | protein-arginine deiminase activity | 0.87% (1/115) | 8.24 | 0.003297 | 0.023777 |
| GO:0009445 | putrescine metabolic process | 0.87% (1/115) | 8.24 | 0.003297 | 0.023777 |
| GO:0003743 | translation initiation factor activity | 1.74% (2/115) | 4.49 | 0.003585 | 0.025187 |
| GO:0043632 | modification-dependent macromolecule catabolic process | 1.74% (2/115) | 4.03 | 0.006658 | 0.029423 |
| GO:0006511 | ubiquitin-dependent protein catabolic process | 1.74% (2/115) | 4.03 | 0.006658 | 0.029423 |
| GO:0019941 | modification-dependent protein catabolic process | 1.74% (2/115) | 4.03 | 0.006658 | 0.029423 |
| GO:0005507 | copper ion binding | 1.74% (2/115) | 4.03 | 0.006658 | 0.029423 |
| GO:0046488 | phosphatidylinositol metabolic process | 1.74% (2/115) | 4.72 | 0.002606 | 0.029756 |
| GO:0009112 | nucleobase metabolic process | 0.87% (1/115) | 7.24 | 0.006584 | 0.031105 |
| GO:0004506 | squalene monooxygenase activity | 0.87% (1/115) | 7.24 | 0.006584 | 0.031105 |
| GO:0000315 | organellar large ribosomal subunit | 0.87% (1/115) | 7.24 | 0.006584 | 0.031105 |
| GO:0046112 | nucleobase biosynthetic process | 0.87% (1/115) | 7.24 | 0.006584 | 0.031105 |
| GO:0009309 | amine biosynthetic process | 0.87% (1/115) | 7.24 | 0.006584 | 0.031105 |
| GO:0031903 | microbody membrane | 0.87% (1/115) | 7.24 | 0.006584 | 0.031105 |
| GO:0005778 | peroxisomal membrane | 0.87% (1/115) | 7.24 | 0.006584 | 0.031105 |
| GO:0050497 | alkylthioltransferase activity | 0.87% (1/115) | 7.24 | 0.006584 | 0.031105 |
| GO:0005762 | mitochondrial large ribosomal subunit | 0.87% (1/115) | 7.24 | 0.006584 | 0.031105 |
| GO:0035596 | methylthiotransferase activity | 0.87% (1/115) | 7.24 | 0.006584 | 0.031105 |
| GO:0042401 | biogenic amine biosynthetic process | 0.87% (1/115) | 7.24 | 0.006584 | 0.031105 |
| GO:0009058 | biosynthetic process | 6.96% (8/115) | 1.63 | 0.004592 | 0.031458 |
| GO:0009987 | cellular process | 17.39% (20/115) | 0.84 | 0.007331 | 0.031884 |
| GO:0006796 | phosphate-containing compound metabolic process | 7.83% (9/115) | 1.59 | 0.003213 | 0.032605 |
| GO:0006793 | phosphorus metabolic process | 7.83% (9/115) | 1.59 | 0.003213 | 0.032605 |
| GO:0019637 | organophosphate metabolic process | 2.61% (3/115) | 2.9 | 0.007758 | 0.032704 |
| GO:0046486 | glycerolipid metabolic process | 1.74% (2/115) | 3.92 | 0.007747 | 0.033169 |
| GO:0006650 | glycerophospholipid metabolic process | 1.74% (2/115) | 4.6 | 0.003077 | 0.033727 |
| GO:0019783 | ubiquitin-like protein peptidase activity | 1.74% (2/115) | 4.2 | 0.005324 | 0.033923 |
| GO:0101005 | deubiquitinase activity | 1.74% (2/115) | 4.2 | 0.005324 | 0.033923 |
| GO:0004843 | cysteine-type deubiquitinase activity | 1.74% (2/115) | 4.2 | 0.005324 | 0.033923 |
| GO:0036094 | small molecule binding | 10.43% (12/115) | 1.14 | 0.008229 | 0.034162 |
| GO:0044255 | cellular lipid metabolic process | 2.61% (3/115) | 3.03 | 0.005983 | 0.036429 |
| GO:1901576 | organic substance biosynthetic process | 6.09% (7/115) | 1.59 | 0.008971 | 0.036687 |
| GO:0060589 | nucleoside-triphosphatase regulator activity | 1.74% (2/115) | 4.07 | 0.006311 | 0.036794 |
| GO:0030695 | GTPase regulator activity | 1.74% (2/115) | 4.07 | 0.006311 | 0.036794 |
| GO:0043168 | anion binding | 10.43% (12/115) | 1.21 | 0.005911 | 0.036807 |
| GO:0051603 | proteolysis involved in protein catabolic process | 1.74% (2/115) | 3.78 | 0.009316 | 0.036994 |
| GO:0071704 | organic substance metabolic process | 16.52% (19/115) | 0.84 | 0.009279 | 0.03739 |
| GO:0019538 | protein metabolic process | 10.43% (12/115) | 1.09 | 0.010972 | 0.042949 |
| GO:1901566 | organonitrogen compound biosynthetic process | 4.35% (5/115) | 1.9 | 0.011281 | 0.043535 |
| GO:0006606 | protein import into nucleus | 0.87% (1/115) | 6.24 | 0.013125 | 0.046706 |
| GO:0051170 | import into nucleus | 0.87% (1/115) | 6.24 | 0.013125 | 0.046706 |
| GO:0061608 | nuclear import signal receptor activity | 0.87% (1/115) | 6.24 | 0.013125 | 0.046706 |
| GO:0034504 | protein localization to nucleus | 0.87% (1/115) | 6.24 | 0.013125 | 0.046706 |
| GO:0003735 | structural constituent of ribosome | 3.48% (4/115) | 2.16 | 0.012582 | 0.047227 |
| GO:0006807 | nitrogen compound metabolic process | 13.91% (16/115) | 0.89 | 0.012481 | 0.047498 |
| GO:0035639 | purine ribonucleoside triphosphate binding | 8.7% (10/115) | 1.17 | 0.013601 | 0.047778 |
| Clade | % in cluster | Enrichment log2 | p-value | Corrected p-value | Gene Family Method |
|---|---|---|---|---|---|
| No enriched Clades found | |||||
| Species | Clustering Method | Target | Jaccard index | Gene Family Method (for comparison) | Actions |
|---|---|---|---|---|---|
| Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_235 | 0.006 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_266 | 0.011 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_290 | 0.006 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_68 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_5 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_9 | 0.011 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_10 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_11 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_22 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_28 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_34 | 0.016 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_35 | 0.014 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_43 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_55 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_62 | 0.014 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_66 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_67 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_72 | 0.014 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_74 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_75 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_91 | 0.011 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_92 | 0.013 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_94 | 0.011 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_97 | 0.012 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_100 | 0.012 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_130 | 0.006 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_144 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_146 | 0.017 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_196 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_198 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_210 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_212 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_237 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_250 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_305 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_356 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_427 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_436 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
| Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_164 | 0.006 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |