ID | Label | % in cluster | Enrichment log2 | p-value | Corrected p-value |
---|---|---|---|---|---|
GO:0005488 | binding | 60.34% (35/58) | 1.66 | 0.0 | 0.0 |
GO:0034660 | ncRNA metabolic process | 12.07% (7/58) | 5.13 | 0.0 | 0.0 |
GO:0097159 | organic cyclic compound binding | 41.38% (24/58) | 1.77 | 0.0 | 1e-06 |
GO:1901363 | heterocyclic compound binding | 41.38% (24/58) | 1.77 | 0.0 | 1e-06 |
GO:0003723 | RNA binding | 15.52% (9/58) | 3.68 | 0.0 | 1e-06 |
GO:0003674 | molecular_function | 65.52% (38/58) | 1.15 | 0.0 | 1e-06 |
GO:0003676 | nucleic acid binding | 31.03% (18/58) | 2.14 | 0.0 | 1e-06 |
GO:0016070 | RNA metabolic process | 12.07% (7/58) | 3.59 | 2e-06 | 4.5e-05 |
GO:0034470 | ncRNA processing | 6.9% (4/58) | 5.23 | 4e-06 | 7.9e-05 |
GO:0005515 | protein binding | 22.41% (13/58) | 2.19 | 4e-06 | 8.1e-05 |
GO:0140101 | catalytic activity, acting on a tRNA | 6.9% (4/58) | 4.98 | 8e-06 | 0.000142 |
GO:0043226 | organelle | 12.07% (7/58) | 3.16 | 1.3e-05 | 0.000158 |
GO:0043229 | intracellular organelle | 12.07% (7/58) | 3.16 | 1.3e-05 | 0.000158 |
GO:0035639 | purine ribonucleoside triphosphate binding | 18.97% (11/58) | 2.3 | 1.2e-05 | 0.000161 |
GO:0006399 | tRNA metabolic process | 6.9% (4/58) | 4.87 | 1.1e-05 | 0.000163 |
GO:0034641 | cellular nitrogen compound metabolic process | 17.24% (10/58) | 2.48 | 1e-05 | 0.000169 |
GO:0005730 | nucleolus | 3.45% (2/58) | 8.23 | 1.6e-05 | 0.000186 |
GO:0032555 | purine ribonucleotide binding | 18.97% (11/58) | 2.22 | 1.9e-05 | 0.000208 |
GO:0032553 | ribonucleotide binding | 18.97% (11/58) | 2.2 | 2.1e-05 | 0.000216 |
GO:0097367 | carbohydrate derivative binding | 18.97% (11/58) | 2.2 | 2.2e-05 | 0.000217 |
GO:0016072 | rRNA metabolic process | 5.17% (3/58) | 5.61 | 3.3e-05 | 0.000287 |
GO:0006364 | rRNA processing | 5.17% (3/58) | 5.61 | 3.3e-05 | 0.000287 |
GO:0017076 | purine nucleotide binding | 18.97% (11/58) | 2.13 | 3.4e-05 | 0.000288 |
GO:0000166 | nucleotide binding | 18.97% (11/58) | 2.06 | 5.3e-05 | 0.000397 |
GO:1901265 | nucleoside phosphate binding | 18.97% (11/58) | 2.06 | 5.3e-05 | 0.000397 |
GO:0043168 | anion binding | 18.97% (11/58) | 2.07 | 5e-05 | 0.000404 |
GO:0006418 | tRNA aminoacylation for protein translation | 5.17% (3/58) | 5.26 | 6.7e-05 | 0.000483 |
GO:0036094 | small molecule binding | 18.97% (11/58) | 2.01 | 7.4e-05 | 0.000512 |
GO:0006396 | RNA processing | 6.9% (4/58) | 4.09 | 9.2e-05 | 0.000613 |
GO:0004812 | aminoacyl-tRNA ligase activity | 5.17% (3/58) | 5.01 | 0.000114 | 0.000668 |
GO:0016875 | ligase activity, forming carbon-oxygen bonds | 5.17% (3/58) | 5.01 | 0.000114 | 0.000668 |
GO:0043038 | amino acid activation | 5.17% (3/58) | 5.01 | 0.000114 | 0.000668 |
GO:0043039 | tRNA aminoacylation | 5.17% (3/58) | 5.01 | 0.000114 | 0.000668 |
GO:0090304 | nucleic acid metabolic process | 12.07% (7/58) | 2.65 | 0.000121 | 0.000693 |
GO:0043232 | intracellular non-membrane-bounded organelle | 8.62% (5/58) | 3.34 | 0.000135 | 0.000728 |
GO:0043228 | non-membrane-bounded organelle | 8.62% (5/58) | 3.34 | 0.000135 | 0.000728 |
GO:0043167 | ion binding | 24.14% (14/58) | 1.52 | 0.000251 | 0.001318 |
GO:0044237 | cellular metabolic process | 20.69% (12/58) | 1.69 | 0.000265 | 0.00132 |
GO:0006139 | nucleobase-containing compound metabolic process | 12.07% (7/58) | 2.47 | 0.00026 | 0.001328 |
GO:0009987 | cellular process | 25.86% (15/58) | 1.41 | 0.000326 | 0.001583 |
GO:0006725 | cellular aromatic compound metabolic process | 12.07% (7/58) | 2.38 | 0.000382 | 0.001763 |
GO:0046483 | heterocycle metabolic process | 12.07% (7/58) | 2.38 | 0.000382 | 0.001763 |
GO:1901360 | organic cyclic compound metabolic process | 12.07% (7/58) | 2.35 | 0.000429 | 0.001935 |
GO:0043170 | macromolecule metabolic process | 20.69% (12/58) | 1.57 | 0.000554 | 0.002441 |
GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | 3.45% (2/58) | 5.71 | 0.000672 | 0.002899 |
GO:0016874 | ligase activity | 5.17% (3/58) | 4.12 | 0.000706 | 0.002976 |
GO:0005524 | ATP binding | 13.79% (8/58) | 2.02 | 0.000737 | 0.00304 |
GO:0008173 | RNA methyltransferase activity | 3.45% (2/58) | 5.59 | 0.000796 | 0.003216 |
GO:0006520 | amino acid metabolic process | 5.17% (3/58) | 3.89 | 0.00112 | 0.004345 |
GO:0032559 | adenyl ribonucleotide binding | 13.79% (8/58) | 1.93 | 0.0011 | 0.004355 |
GO:0030554 | adenyl nucleotide binding | 13.79% (8/58) | 1.84 | 0.001679 | 0.005924 |
GO:0016435 | rRNA (guanine) methyltransferase activity | 1.72% (1/58) | 9.23 | 0.001663 | 0.005975 |
GO:0070476 | rRNA (guanine-N7)-methylation | 1.72% (1/58) | 9.23 | 0.001663 | 0.005975 |
GO:0036265 | RNA (guanine-N7)-methylation | 1.72% (1/58) | 9.23 | 0.001663 | 0.005975 |
GO:0034511 | U3 snoRNA binding | 1.72% (1/58) | 9.23 | 0.001663 | 0.005975 |
GO:0032561 | guanyl ribonucleotide binding | 5.17% (3/58) | 3.49 | 0.00243 | 0.008272 |
GO:0005525 | GTP binding | 5.17% (3/58) | 3.49 | 0.00243 | 0.008272 |
GO:0019001 | guanyl nucleotide binding | 5.17% (3/58) | 3.46 | 0.002606 | 0.008288 |
GO:0008135 | translation factor activity, RNA binding | 3.45% (2/58) | 4.74 | 0.00257 | 0.00831 |
GO:0045182 | translation regulator activity | 3.45% (2/58) | 4.74 | 0.00257 | 0.00831 |
GO:0090079 | translation regulator activity, nucleic acid binding | 3.45% (2/58) | 4.74 | 0.00257 | 0.00831 |
GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | 1.72% (1/58) | 8.23 | 0.003323 | 0.010074 |
GO:0006433 | prolyl-tRNA aminoacylation | 1.72% (1/58) | 8.23 | 0.003323 | 0.010074 |
GO:0004827 | proline-tRNA ligase activity | 1.72% (1/58) | 8.23 | 0.003323 | 0.010074 |
GO:0006807 | nitrogen compound metabolic process | 18.97% (11/58) | 1.33 | 0.003637 | 0.010854 |
GO:0008152 | metabolic process | 22.41% (13/58) | 1.17 | 0.004041 | 0.011877 |
GO:0006082 | organic acid metabolic process | 5.17% (3/58) | 3.21 | 0.004237 | 0.011913 |
GO:0019752 | carboxylic acid metabolic process | 5.17% (3/58) | 3.22 | 0.004177 | 0.011917 |
GO:0043436 | oxoacid metabolic process | 5.17% (3/58) | 3.22 | 0.004177 | 0.011917 |
GO:0008150 | biological_process | 29.31% (17/58) | 0.92 | 0.005562 | 0.014987 |
GO:0009059 | macromolecule biosynthetic process | 6.9% (4/58) | 2.5 | 0.005449 | 0.015101 |
GO:0110165 | cellular anatomical entity | 13.79% (8/58) | 1.55 | 0.005537 | 0.015128 |
GO:0071704 | organic substance metabolic process | 20.69% (12/58) | 1.16 | 0.006151 | 0.016347 |
GO:0030515 | snoRNA binding | 1.72% (1/58) | 7.23 | 0.006636 | 0.017165 |
GO:0016423 | tRNA (guanine) methyltransferase activity | 1.72% (1/58) | 7.23 | 0.006636 | 0.017165 |
GO:0005840 | ribosome | 5.17% (3/58) | 2.79 | 0.009443 | 0.024105 |
GO:0006412 | translation | 5.17% (3/58) | 2.76 | 0.010042 | 0.024976 |
GO:0008175 | tRNA methyltransferase activity | 1.72% (1/58) | 6.65 | 0.009938 | 0.025038 |
GO:0043043 | peptide biosynthetic process | 5.17% (3/58) | 2.73 | 0.010557 | 0.025601 |
GO:0003735 | structural constituent of ribosome | 5.17% (3/58) | 2.73 | 0.010453 | 0.025669 |
GO:0043604 | amide biosynthetic process | 5.17% (3/58) | 2.68 | 0.011523 | 0.027598 |
GO:0006518 | peptide metabolic process | 5.17% (3/58) | 2.67 | 0.011856 | 0.028049 |
GO:0005198 | structural molecule activity | 5.17% (3/58) | 2.65 | 0.012194 | 0.028502 |
GO:0044238 | primary metabolic process | 18.97% (11/58) | 1.08 | 0.012936 | 0.029876 |
GO:0008170 | N-methyltransferase activity | 1.72% (1/58) | 6.23 | 0.013229 | 0.030193 |
GO:0043603 | amide metabolic process | 5.17% (3/58) | 2.6 | 0.013483 | 0.030414 |
GO:0005575 | cellular_component | 13.79% (8/58) | 1.31 | 0.014273 | 0.031828 |
GO:0006414 | translational elongation | 1.72% (1/58) | 6.06 | 0.01487 | 0.032782 |
GO:0003924 | GTPase activity | 3.45% (2/58) | 3.41 | 0.015284 | 0.033316 |
GO:0051020 | GTPase binding | 1.72% (1/58) | 5.91 | 0.016509 | 0.034813 |
GO:0031267 | small GTPase binding | 1.72% (1/58) | 5.91 | 0.016509 | 0.034813 |
GO:0044281 | small molecule metabolic process | 5.17% (3/58) | 2.5 | 0.016151 | 0.034814 |
GO:0031167 | rRNA methylation | 1.72% (1/58) | 5.77 | 0.018145 | 0.037054 |
GO:0070475 | rRNA base methylation | 1.72% (1/58) | 5.77 | 0.018145 | 0.037054 |
GO:0000154 | rRNA modification | 1.72% (1/58) | 5.77 | 0.018145 | 0.037054 |
GO:0008649 | rRNA methyltransferase activity | 1.72% (1/58) | 5.65 | 0.019779 | 0.039557 |
GO:0003746 | translation elongation factor activity | 1.72% (1/58) | 5.65 | 0.019779 | 0.039557 |
GO:0044249 | cellular biosynthetic process | 6.9% (4/58) | 1.92 | 0.021408 | 0.042379 |
GO:0034728 | nucleosome organization | 1.72% (1/58) | 5.33 | 0.024663 | 0.047846 |
GO:0006334 | nucleosome assembly | 1.72% (1/58) | 5.33 | 0.024663 | 0.047846 |
GO:0005634 | nucleus | 3.45% (2/58) | 3.02 | 0.025321 | 0.048637 |
GO:0065004 | protein-DNA complex assembly | 1.72% (1/58) | 5.23 | 0.026286 | 0.049509 |
GO:0001510 | RNA methylation | 1.72% (1/58) | 5.23 | 0.026286 | 0.049509 |
Clade | % in cluster | Enrichment log2 | p-value | Corrected p-value | Gene Family Method |
---|---|---|---|---|---|
No enriched Clades found |
Species | Clustering Method | Target | Jaccard index | Gene Family Method (for comparison) | Actions |
---|---|---|---|---|---|
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_13 | 0.036 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_20 | 0.013 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_94 | 0.024 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_95 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_131 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_178 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_180 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_186 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_210 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_235 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_256 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_279 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_4 | 0.015 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_28 | 0.017 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_47 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_78 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_137 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_179 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_188 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_199 | 0.006 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_220 | 0.028 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_1 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_25 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_34 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_45 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_46 | 0.014 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_64 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_65 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_72 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_85 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_91 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_93 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_98 | 0.023 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_130 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_146 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_152 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_158 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_170 | 0.015 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_230 | 0.016 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_12 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_58 | 0.014 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_100 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_145 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_150 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_165 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_181 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |