ID | Label | % in cluster | Enrichment log2 | p-value | Corrected p-value |
---|---|---|---|---|---|
GO:0004812 | aminoacyl-tRNA ligase activity | 7.94% (5/63) | 5.21 | 0.0 | 9e-06 |
GO:0043038 | amino acid activation | 7.94% (5/63) | 5.21 | 0.0 | 9e-06 |
GO:0043039 | tRNA aminoacylation | 7.94% (5/63) | 5.21 | 0.0 | 9e-06 |
GO:0016875 | ligase activity, forming carbon-oxygen bonds | 7.94% (5/63) | 5.21 | 0.0 | 9e-06 |
GO:0140101 | catalytic activity, acting on a tRNA | 7.94% (5/63) | 4.76 | 1e-06 | 2.7e-05 |
GO:0006399 | tRNA metabolic process | 7.94% (5/63) | 4.78 | 1e-06 | 2.8e-05 |
GO:0034641 | cellular nitrogen compound metabolic process | 19.05% (12/63) | 2.52 | 1e-06 | 2.9e-05 |
GO:0006418 | tRNA aminoacylation for protein translation | 7.94% (5/63) | 5.31 | 0.0 | 3.2e-05 |
GO:0034660 | ncRNA metabolic process | 7.94% (5/63) | 4.21 | 8e-06 | 0.000139 |
GO:0016874 | ligase activity | 7.94% (5/63) | 4.22 | 8e-06 | 0.000146 |
GO:0006520 | amino acid metabolic process | 7.94% (5/63) | 3.99 | 1.7e-05 | 0.000264 |
GO:0140640 | catalytic activity, acting on a nucleic acid | 9.52% (6/63) | 3.07 | 8e-05 | 0.001163 |
GO:0140098 | catalytic activity, acting on RNA | 7.94% (5/63) | 3.42 | 0.000107 | 0.001428 |
GO:0032553 | ribonucleotide binding | 20.63% (13/63) | 1.68 | 0.000157 | 0.001605 |
GO:0097367 | carbohydrate derivative binding | 20.63% (13/63) | 1.67 | 0.000167 | 0.001616 |
GO:0016070 | RNA metabolic process | 9.52% (6/63) | 2.9 | 0.000156 | 0.001693 |
GO:0005524 | ATP binding | 17.46% (11/63) | 1.8 | 0.000273 | 0.001699 |
GO:0006082 | organic acid metabolic process | 7.94% (5/63) | 3.13 | 0.000273 | 0.001758 |
GO:0032559 | adenyl ribonucleotide binding | 19.05% (12/63) | 1.78 | 0.000152 | 0.001765 |
GO:0043436 | oxoacid metabolic process | 7.94% (5/63) | 3.13 | 0.000269 | 0.001803 |
GO:0019752 | carboxylic acid metabolic process | 7.94% (5/63) | 3.13 | 0.000269 | 0.001803 |
GO:0032555 | purine ribonucleotide binding | 20.63% (13/63) | 1.69 | 0.000148 | 0.001841 |
GO:0035639 | purine ribonucleoside triphosphate binding | 19.05% (12/63) | 1.7 | 0.000269 | 0.001952 |
GO:0030554 | adenyl nucleotide binding | 19.05% (12/63) | 1.7 | 0.000262 | 0.001983 |
GO:0044271 | cellular nitrogen compound biosynthetic process | 11.11% (7/63) | 2.48 | 0.000257 | 0.002033 |
GO:0017076 | purine nucleotide binding | 20.63% (13/63) | 1.61 | 0.000252 | 0.002088 |
GO:0006139 | nucleobase-containing compound metabolic process | 11.11% (7/63) | 2.48 | 0.000249 | 0.00217 |
GO:0044281 | small molecule metabolic process | 9.52% (6/63) | 2.78 | 0.000243 | 0.002222 |
GO:0000166 | nucleotide binding | 20.63% (13/63) | 1.54 | 0.0004 | 0.00232 |
GO:1901265 | nucleoside phosphate binding | 20.63% (13/63) | 1.54 | 0.0004 | 0.00232 |
GO:0044237 | cellular metabolic process | 23.81% (15/63) | 1.39 | 0.000424 | 0.00238 |
GO:0006725 | cellular aromatic compound metabolic process | 11.11% (7/63) | 2.33 | 0.000466 | 0.002455 |
GO:0043168 | anion binding | 20.63% (13/63) | 1.52 | 0.000484 | 0.002474 |
GO:0046483 | heterocycle metabolic process | 11.11% (7/63) | 2.34 | 0.000463 | 0.002515 |
GO:1901360 | organic cyclic compound metabolic process | 11.11% (7/63) | 2.31 | 0.000524 | 0.002603 |
GO:1901576 | organic substance biosynthetic process | 12.7% (8/63) | 2.09 | 0.000551 | 0.002662 |
GO:0090304 | nucleic acid metabolic process | 9.52% (6/63) | 2.54 | 0.00059 | 0.002776 |
GO:0036094 | small molecule binding | 20.63% (13/63) | 1.48 | 0.000619 | 0.002834 |
GO:0005840 | ribosome | 7.94% (5/63) | 2.85 | 0.000649 | 0.002896 |
GO:0006412 | translation | 7.94% (5/63) | 2.82 | 0.000724 | 0.003148 |
GO:0009059 | macromolecule biosynthetic process | 9.52% (6/63) | 2.45 | 0.000797 | 0.003153 |
GO:1901566 | organonitrogen compound biosynthetic process | 9.52% (6/63) | 2.46 | 0.000774 | 0.003208 |
GO:0043043 | peptide biosynthetic process | 7.94% (5/63) | 2.79 | 0.000797 | 0.003224 |
GO:0003735 | structural constituent of ribosome | 7.94% (5/63) | 2.8 | 0.000767 | 0.003255 |
GO:0043604 | amide biosynthetic process | 7.94% (5/63) | 2.77 | 0.000851 | 0.003291 |
GO:0006518 | peptide metabolic process | 7.94% (5/63) | 2.72 | 0.000977 | 0.003696 |
GO:0097159 | organic cyclic compound binding | 30.16% (19/63) | 1.05 | 0.001172 | 0.004 |
GO:1901363 | heterocyclic compound binding | 30.16% (19/63) | 1.05 | 0.001172 | 0.004 |
GO:0043603 | amide metabolic process | 7.94% (5/63) | 2.69 | 0.001087 | 0.004025 |
GO:0043232 | intracellular non-membrane-bounded organelle | 7.94% (5/63) | 2.67 | 0.001146 | 0.004068 |
GO:0043228 | non-membrane-bounded organelle | 7.94% (5/63) | 2.67 | 0.001146 | 0.004068 |
GO:0009058 | biosynthetic process | 12.7% (8/63) | 1.91 | 0.001222 | 0.004089 |
GO:0005198 | structural molecule activity | 7.94% (5/63) | 2.64 | 0.001259 | 0.004133 |
GO:0044249 | cellular biosynthetic process | 11.11% (7/63) | 2.05 | 0.001443 | 0.004651 |
GO:0006413 | translational initiation | 3.17% (2/63) | 4.73 | 0.00262 | 0.00829 |
GO:0003876 | AMP deaminase activity | 1.59% (1/63) | 8.34 | 0.003078 | 0.008368 |
GO:0000469 | obsolete cleavage involved in rRNA processing | 1.59% (1/63) | 8.34 | 0.003078 | 0.008368 |
GO:0043101 | purine-containing compound salvage | 1.59% (1/63) | 8.34 | 0.003078 | 0.008368 |
GO:0106380 | purine ribonucleotide salvage | 1.59% (1/63) | 8.34 | 0.003078 | 0.008368 |
GO:0032261 | purine nucleotide salvage | 1.59% (1/63) | 8.34 | 0.003078 | 0.008368 |
GO:0032264 | IMP salvage | 1.59% (1/63) | 8.34 | 0.003078 | 0.008368 |
GO:0047623 | adenosine-phosphate deaminase activity | 1.59% (1/63) | 8.34 | 0.003078 | 0.008368 |
GO:0043094 | cellular metabolic compound salvage | 1.59% (1/63) | 8.34 | 0.003078 | 0.008368 |
GO:0043173 | nucleotide salvage | 1.59% (1/63) | 8.34 | 0.003078 | 0.008368 |
GO:0003743 | translation initiation factor activity | 3.17% (2/63) | 4.3 | 0.0047 | 0.01258 |
GO:0004609 | phosphatidylserine decarboxylase activity | 1.59% (1/63) | 7.34 | 0.006147 | 0.016205 |
GO:0003723 | RNA binding | 7.94% (5/63) | 2.05 | 0.007112 | 0.018471 |
GO:0003676 | nucleic acid binding | 15.87% (10/63) | 1.28 | 0.007331 | 0.018759 |
GO:0090079 | translation regulator activity, nucleic acid binding | 3.17% (2/63) | 3.77 | 0.009507 | 0.02266 |
GO:0045182 | translation regulator activity | 3.17% (2/63) | 3.77 | 0.009507 | 0.02266 |
GO:0008135 | translation factor activity, RNA binding | 3.17% (2/63) | 3.77 | 0.009507 | 0.02266 |
GO:0006188 | IMP biosynthetic process | 1.59% (1/63) | 6.76 | 0.009206 | 0.022883 |
GO:0046040 | IMP metabolic process | 1.59% (1/63) | 6.76 | 0.009206 | 0.022883 |
GO:0043226 | organelle | 7.94% (5/63) | 1.85 | 0.012483 | 0.026169 |
GO:0043229 | intracellular organelle | 7.94% (5/63) | 1.85 | 0.012483 | 0.026169 |
GO:0009167 | purine ribonucleoside monophosphate metabolic process | 1.59% (1/63) | 6.34 | 0.012256 | 0.026328 |
GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | 1.59% (1/63) | 6.34 | 0.012256 | 0.026328 |
GO:0009123 | nucleoside monophosphate metabolic process | 1.59% (1/63) | 6.34 | 0.012256 | 0.026328 |
GO:0009161 | ribonucleoside monophosphate metabolic process | 1.59% (1/63) | 6.34 | 0.012256 | 0.026328 |
GO:0009124 | nucleoside monophosphate biosynthetic process | 1.59% (1/63) | 6.34 | 0.012256 | 0.026328 |
GO:0009126 | purine nucleoside monophosphate metabolic process | 1.59% (1/63) | 6.34 | 0.012256 | 0.026328 |
GO:0009127 | purine nucleoside monophosphate biosynthetic process | 1.59% (1/63) | 6.34 | 0.012256 | 0.026328 |
GO:0009156 | ribonucleoside monophosphate biosynthetic process | 1.59% (1/63) | 6.34 | 0.012256 | 0.026328 |
GO:0019239 | deaminase activity | 1.59% (1/63) | 6.17 | 0.013778 | 0.028539 |
GO:0005488 | binding | 38.1% (24/63) | 0.61 | 0.014286 | 0.028905 |
GO:1901564 | organonitrogen compound metabolic process | 17.46% (11/63) | 1.07 | 0.014182 | 0.029031 |
GO:0009987 | cellular process | 25.4% (16/63) | 0.79 | 0.018057 | 0.036114 |
GO:0006807 | nitrogen compound metabolic process | 19.05% (12/63) | 0.96 | 0.018501 | 0.036171 |
GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | 1.59% (1/63) | 5.76 | 0.018329 | 0.036241 |
GO:0043167 | ion binding | 20.63% (13/63) | 0.9 | 0.018988 | 0.036711 |
GO:0090407 | organophosphate biosynthetic process | 3.17% (2/63) | 3.19 | 0.020354 | 0.038918 |
GO:0008152 | metabolic process | 23.81% (15/63) | 0.79 | 0.021781 | 0.041195 |
GO:0003697 | single-stranded DNA binding | 1.59% (1/63) | 5.44 | 0.022859 | 0.042768 |
GO:0043170 | macromolecule metabolic process | 17.46% (11/63) | 0.95 | 0.02483 | 0.045961 |
Clade | % in cluster | Enrichment log2 | p-value | Corrected p-value | Gene Family Method |
---|---|---|---|---|---|
No enriched Clades found |
Species | Clustering Method | Target | Jaccard index | Gene Family Method (for comparison) | Actions |
---|---|---|---|---|---|
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_13 | 0.029 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_20 | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_27 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_36 | 0.012 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_57 | 0.006 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_93 | 0.006 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_100 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_116 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_121 | 0.026 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_127 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_128 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_134 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_151 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_155 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_186 | 0.017 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_187 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_188 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_211 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_230 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_235 | 0.019 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_244 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_249 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_251 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_252 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_262 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_279 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_287 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_28 | 0.017 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_38 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_81 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_137 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_165 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_179 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_201 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_219 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_15 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_63 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_131 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_152 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_171 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_12 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_58 | 0.013 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_97 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_142 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |