Coexpression cluster: Cluster_137 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003735 structural constituent of ribosome 23.33% (14/60) 4.64 0.0 0.0
GO:0005198 structural molecule activity 23.33% (14/60) 4.44 0.0 0.0
GO:0043604 amide biosynthetic process 21.67% (13/60) 4.5 0.0 0.0
GO:0043043 peptide biosynthetic process 21.67% (13/60) 4.52 0.0 0.0
GO:0006412 translation 21.67% (13/60) 4.55 0.0 0.0
GO:0006518 peptide metabolic process 21.67% (13/60) 4.41 0.0 0.0
GO:0043603 amide metabolic process 21.67% (13/60) 4.37 0.0 0.0
GO:0005840 ribosome 20.0% (12/60) 4.47 0.0 0.0
GO:0009059 macromolecule biosynthetic process 23.33% (14/60) 3.92 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 23.33% (14/60) 3.92 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 20.0% (12/60) 4.24 0.0 0.0
GO:0043228 non-membrane-bounded organelle 20.0% (12/60) 4.24 0.0 0.0
GO:0044249 cellular biosynthetic process 25.0% (15/60) 3.35 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 21.67% (13/60) 3.61 0.0 0.0
GO:1901576 organic substance biosynthetic process 25.0% (15/60) 3.21 0.0 0.0
GO:0009058 biosynthetic process 25.0% (15/60) 3.05 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 25.0% (15/60) 3.03 0.0 0.0
GO:0043226 organelle 20.0% (12/60) 3.5 0.0 0.0
GO:0043229 intracellular organelle 20.0% (12/60) 3.5 0.0 0.0
GO:0044237 cellular metabolic process 30.0% (18/60) 1.74 3e-06 3.8e-05
GO:1901564 organonitrogen compound metabolic process 26.67% (16/60) 1.68 2.3e-05 0.000266
GO:0009987 cellular process 35.0% (21/60) 1.33 3.2e-05 0.000364
GO:0006807 nitrogen compound metabolic process 28.33% (17/60) 1.54 4e-05 0.000431
GO:0005575 cellular_component 25.0% (15/60) 1.66 4.8e-05 0.000496
GO:0043170 macromolecule metabolic process 26.67% (16/60) 1.57 5.4e-05 0.000535
GO:0019538 protein metabolic process 23.33% (14/60) 1.69 7.4e-05 0.000703
GO:0110165 cellular anatomical entity 21.67% (13/60) 1.73 0.000106 0.000976
GO:0071704 organic substance metabolic process 30.0% (18/60) 1.29 0.000208 0.00184
GO:0051128 regulation of cellular component organization 3.33% (2/60) 6.25 0.000313 0.002679
GO:0044238 primary metabolic process 28.33% (17/60) 1.27 0.000412 0.003407
GO:0008152 metabolic process 30.0% (18/60) 1.18 0.000543 0.004208
GO:0003746 translation elongation factor activity 3.33% (2/60) 5.88 0.00053 0.004236
GO:0033046 negative regulation of sister chromatid segregation 1.67% (1/60) 9.34 0.001542 0.007967
GO:0033048 negative regulation of mitotic sister chromatid segregation 1.67% (1/60) 9.34 0.001542 0.007967
GO:0045839 negative regulation of mitotic nuclear division 1.67% (1/60) 9.34 0.001542 0.007967
GO:0051784 negative regulation of nuclear division 1.67% (1/60) 9.34 0.001542 0.007967
GO:1905819 negative regulation of chromosome separation 1.67% (1/60) 9.34 0.001542 0.007967
GO:0045841 negative regulation of mitotic metaphase/anaphase transition 1.67% (1/60) 9.34 0.001542 0.007967
GO:0045930 negative regulation of mitotic cell cycle 1.67% (1/60) 9.34 0.001542 0.007967
GO:2000816 negative regulation of mitotic sister chromatid separation 1.67% (1/60) 9.34 0.001542 0.007967
GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle 1.67% (1/60) 9.34 0.001542 0.007967
GO:0071174 mitotic spindle checkpoint signaling 1.67% (1/60) 9.34 0.001542 0.007967
GO:0007093 mitotic cell cycle checkpoint signaling 1.67% (1/60) 9.34 0.001542 0.007967
GO:0007094 mitotic spindle assembly checkpoint signaling 1.67% (1/60) 9.34 0.001542 0.007967
GO:0031577 spindle checkpoint signaling 1.67% (1/60) 9.34 0.001542 0.007967
GO:0071173 spindle assembly checkpoint signaling 1.67% (1/60) 9.34 0.001542 0.007967
GO:1901991 negative regulation of mitotic cell cycle phase transition 1.67% (1/60) 9.34 0.001542 0.007967
GO:0051985 negative regulation of chromosome segregation 1.67% (1/60) 9.34 0.001542 0.007967
GO:0051783 regulation of nuclear division 1.67% (1/60) 8.34 0.003082 0.014153
GO:2001251 negative regulation of chromosome organization 1.67% (1/60) 8.34 0.003082 0.014153
GO:0007088 regulation of mitotic nuclear division 1.67% (1/60) 8.34 0.003082 0.014153
GO:0010965 regulation of mitotic sister chromatid separation 1.67% (1/60) 8.34 0.003082 0.014153
GO:0033047 regulation of mitotic sister chromatid segregation 1.67% (1/60) 8.34 0.003082 0.014153
GO:1905818 regulation of chromosome separation 1.67% (1/60) 8.34 0.003082 0.014153
GO:0000075 cell cycle checkpoint signaling 1.67% (1/60) 7.76 0.004619 0.017899
GO:0007346 regulation of mitotic cell cycle 1.67% (1/60) 7.76 0.004619 0.017899
GO:0033045 regulation of sister chromatid segregation 1.67% (1/60) 7.76 0.004619 0.017899
GO:0030071 regulation of mitotic metaphase/anaphase transition 1.67% (1/60) 7.76 0.004619 0.017899
GO:0045786 negative regulation of cell cycle 1.67% (1/60) 7.76 0.004619 0.017899
GO:0010948 negative regulation of cell cycle process 1.67% (1/60) 7.76 0.004619 0.017899
GO:1901990 regulation of mitotic cell cycle phase transition 1.67% (1/60) 7.76 0.004619 0.017899
GO:1901988 negative regulation of cell cycle phase transition 1.67% (1/60) 7.76 0.004619 0.017899
GO:0051983 regulation of chromosome segregation 1.67% (1/60) 7.76 0.004619 0.017899
GO:1902099 regulation of metaphase/anaphase transition of cell cycle 1.67% (1/60) 7.76 0.004619 0.017899
GO:0009143 nucleoside triphosphate catabolic process 1.67% (1/60) 7.34 0.006154 0.022444
GO:0033044 regulation of chromosome organization 1.67% (1/60) 7.34 0.006154 0.022444
GO:1901292 nucleoside phosphate catabolic process 1.67% (1/60) 7.34 0.006154 0.022444
GO:0008150 biological_process 36.67% (22/60) 0.75 0.006081 0.023203
GO:0045182 translation regulator activity 3.33% (2/60) 4.02 0.00684 0.023891
GO:0008135 translation factor activity, RNA binding 3.33% (2/60) 4.02 0.00684 0.023891
GO:0090079 translation regulator activity, nucleic acid binding 3.33% (2/60) 4.02 0.00684 0.023891
GO:0016272 prefoldin complex 1.67% (1/60) 6.76 0.009217 0.025684
GO:0045905 positive regulation of translational termination 1.67% (1/60) 6.76 0.009217 0.025684
GO:0045901 positive regulation of translational elongation 1.67% (1/60) 6.76 0.009217 0.025684
GO:0045727 positive regulation of translation 1.67% (1/60) 6.76 0.009217 0.025684
GO:0043243 positive regulation of protein-containing complex disassembly 1.67% (1/60) 6.76 0.009217 0.025684
GO:0010564 regulation of cell cycle process 1.67% (1/60) 6.76 0.009217 0.025684
GO:0010628 positive regulation of gene expression 1.67% (1/60) 6.76 0.009217 0.025684
GO:0047429 nucleoside triphosphate diphosphatase activity 1.67% (1/60) 6.76 0.009217 0.025684
GO:0051130 positive regulation of cellular component organization 1.67% (1/60) 6.76 0.009217 0.025684
GO:0010608 post-transcriptional regulation of gene expression 1.67% (1/60) 6.76 0.009217 0.025684
GO:0034248 regulation of amide metabolic process 1.67% (1/60) 6.76 0.009217 0.025684
GO:0006449 regulation of translational termination 1.67% (1/60) 6.76 0.009217 0.025684
GO:0006448 regulation of translational elongation 1.67% (1/60) 6.76 0.009217 0.025684
GO:0006417 regulation of translation 1.67% (1/60) 6.76 0.009217 0.025684
GO:0051247 positive regulation of protein metabolic process 1.67% (1/60) 6.76 0.009217 0.025684
GO:0034250 positive regulation of amide metabolic process 1.67% (1/60) 6.76 0.009217 0.025684
GO:1901987 regulation of cell cycle phase transition 1.67% (1/60) 7.02 0.007687 0.026114
GO:1903047 mitotic cell cycle process 1.67% (1/60) 7.02 0.007687 0.026114
GO:0051129 negative regulation of cellular component organization 1.67% (1/60) 6.53 0.010745 0.029284
GO:0010639 negative regulation of organelle organization 1.67% (1/60) 6.53 0.010745 0.029284
GO:0046434 organophosphate catabolic process 1.67% (1/60) 6.34 0.012271 0.033078
GO:0006563 L-serine metabolic process 1.67% (1/60) 6.02 0.015315 0.035497
GO:0031325 positive regulation of cellular metabolic process 1.67% (1/60) 6.02 0.015315 0.035497
GO:0031328 positive regulation of cellular biosynthetic process 1.67% (1/60) 6.02 0.015315 0.035497
GO:0006535 cysteine biosynthetic process from serine 1.67% (1/60) 6.02 0.015315 0.035497
GO:0009001 serine O-acetyltransferase activity 1.67% (1/60) 6.02 0.015315 0.035497
GO:0051173 positive regulation of nitrogen compound metabolic process 1.67% (1/60) 6.02 0.015315 0.035497
GO:0009891 positive regulation of biosynthetic process 1.67% (1/60) 6.02 0.015315 0.035497
GO:0019344 cysteine biosynthetic process 1.67% (1/60) 6.02 0.015315 0.035497
GO:0016413 O-acetyltransferase activity 1.67% (1/60) 6.02 0.015315 0.035497
GO:0016412 serine O-acyltransferase activity 1.67% (1/60) 6.02 0.015315 0.035497
GO:0009893 positive regulation of metabolic process 1.67% (1/60) 6.02 0.015315 0.035497
GO:0009070 serine family amino acid biosynthetic process 1.67% (1/60) 6.02 0.015315 0.035497
GO:0010557 positive regulation of macromolecule biosynthetic process 1.67% (1/60) 6.02 0.015315 0.035497
GO:0010604 positive regulation of macromolecule metabolic process 1.67% (1/60) 6.02 0.015315 0.035497
GO:0033043 regulation of organelle organization 1.67% (1/60) 6.02 0.015315 0.035497
GO:0043244 regulation of protein-containing complex disassembly 1.67% (1/60) 5.88 0.016834 0.038302
GO:0048522 positive regulation of cellular process 1.67% (1/60) 5.88 0.016834 0.038302
GO:0043022 ribosome binding 1.67% (1/60) 5.76 0.018351 0.041372
GO:0000097 sulfur amino acid biosynthetic process 1.67% (1/60) 5.53 0.021377 0.047761
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_20 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_180 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_4 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_16 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_28 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_34 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_57 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_62 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_92 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_94 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_120 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_158 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_169 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_173 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_180 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_190 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_209 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_224 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_225 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_230 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_232 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_63 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_88 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_98 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_152 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_12 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_58 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (60) (download table)

InterPro Domains

GO Terms

Family Terms