Coexpression cluster: Cluster_146 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003674 molecular_function 66.67% (46/69) 1.17 0.0 0.0
GO:0006886 intracellular protein transport 8.7% (6/69) 5.5 0.0 0.0
GO:0003723 RNA binding 14.49% (10/69) 3.59 0.0 1e-06
GO:0005488 binding 49.28% (34/69) 1.37 0.0 1e-06
GO:0033036 macromolecule localization 8.7% (6/69) 4.88 0.0 1e-06
GO:0008104 protein localization 8.7% (6/69) 4.88 0.0 1e-06
GO:0070727 cellular macromolecule localization 8.7% (6/69) 4.88 0.0 1e-06
GO:0045184 establishment of protein localization 8.7% (6/69) 4.88 0.0 1e-06
GO:0046907 intracellular transport 8.7% (6/69) 4.8 0.0 2e-06
GO:0051649 establishment of localization in cell 8.7% (6/69) 4.8 0.0 2e-06
GO:0015031 protein transport 8.7% (6/69) 4.92 0.0 2e-06
GO:0071705 nitrogen compound transport 8.7% (6/69) 4.57 0.0 4e-06
GO:0051641 cellular localization 8.7% (6/69) 4.42 0.0 6e-06
GO:0071702 organic substance transport 8.7% (6/69) 4.35 1e-06 8e-06
GO:0097159 organic cyclic compound binding 34.78% (24/69) 1.52 1e-06 1e-05
GO:1901363 heterocyclic compound binding 34.78% (24/69) 1.52 1e-06 1e-05
GO:0031267 small GTPase binding 4.35% (3/69) 7.24 1e-06 1.1e-05
GO:0051020 GTPase binding 4.35% (3/69) 7.24 1e-06 1.1e-05
GO:0017076 purine nucleotide binding 18.84% (13/69) 2.12 7e-06 8e-05
GO:0019899 enzyme binding 4.35% (3/69) 6.04 1.3e-05 0.000115
GO:1901265 nucleoside phosphate binding 18.84% (13/69) 2.05 1.2e-05 0.000116
GO:0000166 nucleotide binding 18.84% (13/69) 2.05 1.2e-05 0.000116
GO:0035639 purine ribonucleoside triphosphate binding 17.39% (12/69) 2.17 1.2e-05 0.000124
GO:0036094 small molecule binding 18.84% (13/69) 2.0 1.8e-05 0.000157
GO:0034504 protein localization to nucleus 2.9% (2/69) 7.98 2.3e-05 0.00016
GO:0006606 protein import into nucleus 2.9% (2/69) 7.98 2.3e-05 0.00016
GO:0061608 nuclear import signal receptor activity 2.9% (2/69) 7.98 2.3e-05 0.00016
GO:0051170 import into nucleus 2.9% (2/69) 7.98 2.3e-05 0.00016
GO:0097367 carbohydrate derivative binding 17.39% (12/69) 2.07 2.4e-05 0.000161
GO:0032555 purine ribonucleotide binding 17.39% (12/69) 2.09 2e-05 0.000171
GO:0032553 ribonucleotide binding 17.39% (12/69) 2.08 2.3e-05 0.000181
GO:0140142 nucleocytoplasmic carrier activity 2.9% (2/69) 7.66 3.8e-05 0.00025
GO:0043168 anion binding 17.39% (12/69) 1.94 5.6e-05 0.000356
GO:0030554 adenyl nucleotide binding 15.94% (11/69) 2.04 6.4e-05 0.000393
GO:0005524 ATP binding 14.49% (10/69) 2.09 0.000109 0.000646
GO:0140104 molecular carrier activity 2.9% (2/69) 6.66 0.000172 0.000993
GO:0032559 adenyl ribonucleotide binding 14.49% (10/69) 2.0 0.00018 0.001013
GO:0006913 nucleocytoplasmic transport 2.9% (2/69) 6.4 0.000251 0.001341
GO:0051169 nuclear transport 2.9% (2/69) 6.4 0.000251 0.001341
GO:0003676 nucleic acid binding 20.29% (14/69) 1.52 0.00028 0.001458
GO:0072594 establishment of protein localization to organelle 2.9% (2/69) 5.89 0.000515 0.002549
GO:0033365 protein localization to organelle 2.9% (2/69) 5.89 0.000515 0.002549
GO:0009987 cellular process 23.19% (16/69) 1.26 0.000782 0.00378
GO:0017111 ribonucleoside triphosphate phosphatase activity 5.8% (4/69) 3.1 0.001233 0.005828
GO:0008150 biological_process 30.43% (21/69) 0.98 0.001309 0.006051
GO:0016579 protein deubiquitination 2.9% (2/69) 5.07 0.001619 0.006735
GO:0070646 protein modification by small protein removal 2.9% (2/69) 5.07 0.001619 0.006735
GO:0009059 macromolecule biosynthetic process 7.25% (5/69) 2.58 0.00154 0.006816
GO:0016817 hydrolase activity, acting on acid anhydrides 5.8% (4/69) 2.98 0.001711 0.006843
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 5.8% (4/69) 2.98 0.001687 0.006879
GO:0016462 pyrophosphatase activity 5.8% (4/69) 3.02 0.001524 0.006892
GO:0043167 ion binding 20.29% (14/69) 1.27 0.001598 0.006925
GO:0009894 regulation of catabolic process 1.45% (1/69) 8.98 0.001978 0.006975
GO:0000502 proteasome complex 1.45% (1/69) 8.98 0.001978 0.006975
GO:0042176 regulation of protein catabolic process 1.45% (1/69) 8.98 0.001978 0.006975
GO:0003735 structural constituent of ribosome 5.8% (4/69) 2.9 0.002074 0.007191
GO:0004843 cysteine-type deubiquitinase activity 2.9% (2/69) 4.94 0.001958 0.007272
GO:0019783 ubiquitin-like protein peptidase activity 2.9% (2/69) 4.94 0.001958 0.007272
GO:0101005 deubiquitinase activity 2.9% (2/69) 4.94 0.001958 0.007272
GO:0005515 protein binding 14.49% (10/69) 1.56 0.001946 0.007637
GO:0005198 structural molecule activity 5.8% (4/69) 2.82 0.002552 0.008701
GO:0043170 macromolecule metabolic process 17.39% (12/69) 1.32 0.002695 0.009041
GO:0006432 phenylalanyl-tRNA aminoacylation 1.45% (1/69) 7.98 0.003953 0.01265
GO:0004826 phenylalanine-tRNA ligase activity 1.45% (1/69) 7.98 0.003953 0.01265
GO:0006418 tRNA aminoacylation for protein translation 2.9% (2/69) 4.43 0.003937 0.012999
GO:0016875 ligase activity, forming carbon-oxygen bonds 2.9% (2/69) 4.17 0.005545 0.0158
GO:0043039 tRNA aminoacylation 2.9% (2/69) 4.17 0.005545 0.0158
GO:0004812 aminoacyl-tRNA ligase activity 2.9% (2/69) 4.17 0.005545 0.0158
GO:0043038 amino acid activation 2.9% (2/69) 4.17 0.005545 0.0158
GO:0044183 protein folding chaperone 2.9% (2/69) 4.15 0.00574 0.016133
GO:0140662 ATP-dependent protein folding chaperone 2.9% (2/69) 4.23 0.005166 0.01628
GO:0051179 localization 8.7% (6/69) 1.87 0.005968 0.016551
GO:0006810 transport 8.7% (6/69) 1.9 0.005439 0.016638
GO:0051234 establishment of localization 8.7% (6/69) 1.89 0.005536 0.016687
GO:1901564 organonitrogen compound metabolic process 14.49% (10/69) 1.35 0.005402 0.016771
GO:0070647 protein modification by small protein conjugation or removal 2.9% (2/69) 3.87 0.008309 0.02274
GO:0044249 cellular biosynthetic process 7.25% (5/69) 1.99 0.008557 0.023114
GO:0140101 catalytic activity, acting on a tRNA 2.9% (2/69) 3.73 0.010005 0.026679
GO:0043687 post-translational protein modification 2.9% (2/69) 3.62 0.01157 0.030082
GO:0006399 tRNA metabolic process 2.9% (2/69) 3.62 0.01157 0.030082
GO:1905369 endopeptidase complex 1.45% (1/69) 6.4 0.011813 0.030335
GO:1901576 organic substance biosynthetic process 7.25% (5/69) 1.84 0.012929 0.032794
GO:0006412 translation 4.35% (3/69) 2.51 0.016039 0.040193
GO:0043043 peptide biosynthetic process 4.35% (3/69) 2.48 0.016842 0.041705
GO:0006414 translational elongation 1.45% (1/69) 5.81 0.017668 0.043235
GO:0043604 amide biosynthetic process 4.35% (3/69) 2.43 0.018346 0.043861
GO:0016874 ligase activity 2.9% (2/69) 3.28 0.018147 0.043891
GO:0006518 peptide metabolic process 4.35% (3/69) 2.42 0.018863 0.044586
GO:0019538 protein metabolic process 11.59% (8/69) 1.24 0.019485 0.045539
GO:0009058 biosynthetic process 7.25% (5/69) 1.68 0.01975 0.045644
GO:0043603 amide metabolic process 4.35% (3/69) 2.35 0.021384 0.048345
GO:0003924 GTPase activity 2.9% (2/69) 3.16 0.021198 0.048453
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_7 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_21 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_62 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_106 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_108 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_113 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_129 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_137 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_151 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_152 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_159 0.015 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_165 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_194 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_202 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_219 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_266 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_274 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_33 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_41 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_47 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_130 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_179 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_188 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_196 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_202 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_215 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_220 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_229 0.017 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_240 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_4 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_19 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_20 0.017 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_34 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_46 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_58 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_60 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_63 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_67 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_70 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_80 0.017 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_85 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_86 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_91 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_92 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_94 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_98 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_119 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_121 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_130 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_139 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_140 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_152 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_153 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_154 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_159 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_167 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_177 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_197 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_209 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_212 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_214 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_427 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_27 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_73 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (69) (download table)

InterPro Domains

GO Terms

Family Terms