Coexpression cluster: Cluster_60 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003674 molecular_function 67.9% (55/81) 1.2 0.0 0.0
GO:0003824 catalytic activity 45.68% (37/81) 1.56 0.0 0.0
GO:0016757 glycosyltransferase activity 11.11% (9/81) 3.84 0.0 1e-06
GO:0008194 UDP-glycosyltransferase activity 8.64% (7/81) 4.65 0.0 1e-06
GO:0020037 heme binding 11.11% (9/81) 3.7 0.0 2e-06
GO:0046906 tetrapyrrole binding 11.11% (9/81) 3.67 0.0 2e-06
GO:0016491 oxidoreductase activity 14.81% (12/81) 2.69 0.0 1.2e-05
GO:0005506 iron ion binding 8.64% (7/81) 3.88 1e-06 1.3e-05
GO:0004497 monooxygenase activity 8.64% (7/81) 3.88 1e-06 1.4e-05
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 8.64% (7/81) 3.9 0.0 1.5e-05
GO:0016740 transferase activity 19.75% (16/81) 2.02 2e-06 3.4e-05
GO:1901363 heterocyclic compound binding 30.86% (25/81) 1.35 6e-06 0.000125
GO:0097159 organic cyclic compound binding 30.86% (25/81) 1.35 6e-06 0.000125
GO:2001141 regulation of RNA biosynthetic process 9.88% (8/81) 2.91 1.1e-05 0.000191
GO:0006355 regulation of DNA-templated transcription 9.88% (8/81) 2.91 1.1e-05 0.000191
GO:0051252 regulation of RNA metabolic process 9.88% (8/81) 2.89 1.3e-05 0.0002
GO:0019219 regulation of nucleobase-containing compound metabolic process 9.88% (8/81) 2.86 1.5e-05 0.000226
GO:0031326 regulation of cellular biosynthetic process 9.88% (8/81) 2.77 2.3e-05 0.00024
GO:0010556 regulation of macromolecule biosynthetic process 9.88% (8/81) 2.77 2.3e-05 0.00024
GO:0010468 regulation of gene expression 9.88% (8/81) 2.77 2.3e-05 0.00024
GO:0009889 regulation of biosynthetic process 9.88% (8/81) 2.77 2.3e-05 0.00024
GO:0008150 biological_process 34.57% (28/81) 1.16 1.8e-05 0.000249
GO:0080090 regulation of primary metabolic process 9.88% (8/81) 2.78 2.2e-05 0.00028
GO:0051171 regulation of nitrogen compound metabolic process 9.88% (8/81) 2.78 2.2e-05 0.00028
GO:0019222 regulation of metabolic process 9.88% (8/81) 2.71 3.2e-05 0.000297
GO:0060255 regulation of macromolecule metabolic process 9.88% (8/81) 2.71 3.2e-05 0.000305
GO:0031323 regulation of cellular metabolic process 9.88% (8/81) 2.71 3.2e-05 0.000305
GO:0050794 regulation of cellular process 9.88% (8/81) 2.43 0.000123 0.001068
GO:0003700 DNA-binding transcription factor activity 6.17% (5/81) 3.39 0.000122 0.001093
GO:0050789 regulation of biological process 9.88% (8/81) 2.41 0.000133 0.001112
GO:0065007 biological regulation 9.88% (8/81) 2.39 0.000149 0.001207
GO:0140110 transcription regulator activity 6.17% (5/81) 3.26 0.00018 0.001413
GO:0033875 ribonucleoside bisphosphate metabolic process 2.47% (2/81) 6.43 0.000237 0.001699
GO:0033865 nucleoside bisphosphate metabolic process 2.47% (2/81) 6.43 0.000237 0.001699
GO:0034032 purine nucleoside bisphosphate metabolic process 2.47% (2/81) 6.43 0.000237 0.001699
GO:0005975 carbohydrate metabolic process 7.41% (6/81) 2.73 0.000301 0.002101
GO:0046527 glucosyltransferase activity 3.7% (3/81) 4.48 0.00034 0.002304
GO:0003677 DNA binding 9.88% (8/81) 2.14 0.000469 0.0031
GO:0016798 hydrolase activity, acting on glycosyl bonds 6.17% (5/81) 2.79 0.000804 0.005177
GO:0045337 farnesyl diphosphate biosynthetic process 1.23% (1/81) 8.75 0.002323 0.010228
GO:0004363 glutathione synthase activity 1.23% (1/81) 8.75 0.002323 0.010228
GO:0035383 thioester metabolic process 1.23% (1/81) 8.75 0.002323 0.010228
GO:1902767 isoprenoid biosynthetic process via mevalonate 1.23% (1/81) 8.75 0.002323 0.010228
GO:0006750 glutathione biosynthetic process 1.23% (1/81) 8.75 0.002323 0.010228
GO:0045338 farnesyl diphosphate metabolic process 1.23% (1/81) 8.75 0.002323 0.010228
GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway 1.23% (1/81) 8.75 0.002323 0.010228
GO:0006637 acyl-CoA metabolic process 1.23% (1/81) 8.75 0.002323 0.010228
GO:0004421 hydroxymethylglutaryl-CoA synthase activity 1.23% (1/81) 8.75 0.002323 0.010228
GO:0006084 acetyl-CoA metabolic process 1.23% (1/81) 8.75 0.002323 0.010228
GO:0019184 nonribosomal peptide biosynthetic process 1.23% (1/81) 8.75 0.002323 0.010228
GO:1904091 non-ribosomal peptide synthetase activity 1.23% (1/81) 8.75 0.002323 0.010228
GO:0005488 binding 33.33% (27/81) 0.81 0.001634 0.010255
GO:0006073 obsolete cellular glucan metabolic process 2.47% (2/81) 5.0 0.001801 0.010273
GO:0005618 cell wall 2.47% (2/81) 5.0 0.001801 0.010273
GO:0016762 xyloglucan:xyloglucosyl transferase activity 2.47% (2/81) 5.0 0.001801 0.010273
GO:0048046 apoplast 2.47% (2/81) 5.0 0.001801 0.010273
GO:0016758 hexosyltransferase activity 3.7% (3/81) 3.63 0.001857 0.010355
GO:0005576 extracellular region 2.47% (2/81) 4.75 0.002526 0.010745
GO:0030312 external encapsulating structure 2.47% (2/81) 4.75 0.002526 0.010745
GO:0043167 ion binding 18.52% (15/81) 1.14 0.002861 0.011968
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds 4.94% (4/81) 2.59 0.004548 0.018715
GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity 1.23% (1/81) 7.75 0.00464 0.018784
GO:0019693 ribose phosphate metabolic process 2.47% (2/81) 4.23 0.005161 0.019929
GO:0009259 ribonucleotide metabolic process 2.47% (2/81) 4.23 0.005161 0.019929
GO:0009150 purine ribonucleotide metabolic process 2.47% (2/81) 4.23 0.005161 0.019929
GO:0008152 metabolic process 19.75% (16/81) 0.99 0.005767 0.021932
GO:0050896 response to stimulus 4.94% (4/81) 2.42 0.006724 0.02519
GO:0071704 organic substance metabolic process 18.52% (15/81) 1.0 0.006982 0.025398
GO:0006749 glutathione metabolic process 1.23% (1/81) 7.17 0.006952 0.02566
GO:0006163 purine nucleotide metabolic process 2.47% (2/81) 3.92 0.007828 0.028069
GO:0072521 purine-containing compound metabolic process 2.47% (2/81) 3.89 0.008096 0.028619
GO:0016746 acyltransferase activity 3.7% (3/81) 2.84 0.008722 0.030406
GO:0009117 nucleotide metabolic process 2.47% (2/81) 3.66 0.010991 0.03779
GO:0015936 coenzyme A metabolic process 1.23% (1/81) 6.43 0.01156 0.039209
GO:0046914 transition metal ion binding 8.64% (7/81) 1.49 0.012393 0.040929
GO:0006753 nucleoside phosphate metabolic process 2.47% (2/81) 3.56 0.012585 0.041024
GO:0044238 primary metabolic process 17.28% (14/81) 0.95 0.012387 0.041454
GO:0110165 cellular anatomical entity 11.11% (9/81) 1.24 0.013676 0.044008
GO:0016881 acid-amino acid ligase activity 1.23% (1/81) 6.17 0.013856 0.044023
GO:0055086 nucleobase-containing small molecule metabolic process 2.47% (2/81) 3.43 0.014975 0.046986
GO:0032296 double-stranded RNA-specific ribonuclease activity 1.23% (1/81) 5.94 0.016147 0.047126
GO:0008483 transaminase activity 1.23% (1/81) 5.94 0.016147 0.047126
GO:0016114 terpenoid biosynthetic process 1.23% (1/81) 5.94 0.016147 0.047126
GO:0004525 ribonuclease III activity 1.23% (1/81) 5.94 0.016147 0.047126
GO:0006721 terpenoid metabolic process 1.23% (1/81) 5.94 0.016147 0.047126
GO:0016769 transferase activity, transferring nitrogenous groups 1.23% (1/81) 5.94 0.016147 0.047126
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_30 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_87 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_101 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_127 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_202 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_246 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_261 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_265 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_269 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_17 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_20 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_79 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_120 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_158 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_205 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_215 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_221 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_233 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_4 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_7 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_8 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_16 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_20 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_39 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_50 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_69 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_79 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_85 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_87 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_93 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_97 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_100 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_103 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_107 0.016 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_110 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_119 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_124 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_127 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_131 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_146 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_149 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_179 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_197 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_214 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_250 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_68 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (81) (download table)

InterPro Domains

GO Terms

Family Terms