Coexpression cluster: Cluster_130 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005839 proteasome core complex 6.36% (11/173) 6.75 0.0 0.0
GO:0051603 proteolysis involved in protein catabolic process 8.09% (14/173) 5.25 0.0 0.0
GO:0016887 ATP hydrolysis activity 8.67% (15/173) 4.49 0.0 0.0
GO:0006508 proteolysis 13.29% (23/173) 3.15 0.0 0.0
GO:0140535 intracellular protein-containing complex 6.36% (11/173) 4.93 0.0 0.0
GO:0019773 proteasome core complex, alpha-subunit complex 3.47% (6/173) 7.4 0.0 0.0
GO:0017111 ribonucleoside triphosphate phosphatase activity 9.25% (16/173) 3.43 0.0 0.0
GO:0016462 pyrophosphatase activity 9.25% (16/173) 3.35 0.0 0.0
GO:0016817 hydrolase activity, acting on acid anhydrides 9.25% (16/173) 3.3 0.0 0.0
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 9.25% (16/173) 3.31 0.0 0.0
GO:0006511 ubiquitin-dependent protein catabolic process 5.2% (9/173) 4.9 0.0 0.0
GO:0043632 modification-dependent macromolecule catabolic process 5.2% (9/173) 4.9 0.0 0.0
GO:0019941 modification-dependent protein catabolic process 5.2% (9/173) 4.9 0.0 0.0
GO:1902494 catalytic complex 6.94% (12/173) 3.81 0.0 0.0
GO:0016787 hydrolase activity 18.5% (32/173) 1.91 0.0 0.0
GO:0009057 macromolecule catabolic process 5.2% (9/173) 4.2 0.0 0.0
GO:0004843 cysteine-type deubiquitinase activity 3.47% (6/173) 4.7 0.0 2e-06
GO:0019783 ubiquitin-like protein peptidase activity 3.47% (6/173) 4.7 0.0 2e-06
GO:0101005 deubiquitinase activity 3.47% (6/173) 4.7 0.0 2e-06
GO:1901575 organic substance catabolic process 5.2% (9/173) 3.38 0.0 4e-06
GO:0008233 peptidase activity 8.09% (14/173) 2.48 0.0 4e-06
GO:0009056 catabolic process 5.2% (9/173) 3.34 0.0 4e-06
GO:0019538 protein metabolic process 16.76% (29/173) 1.22 1.8e-05 0.000221
GO:0006807 nitrogen compound metabolic process 20.23% (35/173) 1.05 2.4e-05 0.00028
GO:0008234 cysteine-type peptidase activity 4.05% (7/173) 3.03 2.7e-05 0.000302
GO:0070647 protein modification by small protein conjugation or removal 3.47% (6/173) 3.33 3.2e-05 0.000342
GO:1901564 organonitrogen compound metabolic process 17.92% (31/173) 1.1 4e-05 0.000401
GO:0032991 protein-containing complex 6.94% (12/173) 2.04 4.2e-05 0.000404
GO:0003824 catalytic activity 31.21% (54/173) 0.75 4e-05 0.000415
GO:0044238 primary metabolic process 22.54% (39/173) 0.94 4.7e-05 0.000442
GO:0043170 macromolecule metabolic process 18.5% (32/173) 1.05 6.3e-05 0.000535
GO:0016579 protein deubiquitination 2.31% (4/173) 4.23 6.3e-05 0.000552
GO:0070646 protein modification by small protein removal 2.31% (4/173) 4.23 6.3e-05 0.000552
GO:0005488 binding 35.26% (61/173) 0.65 7.8e-05 0.000642
GO:0008237 metallopeptidase activity 2.89% (5/173) 3.49 8.8e-05 0.000702
GO:0071704 organic substance metabolic process 22.54% (39/173) 0.88 0.000109 0.000849
GO:0043687 post-translational protein modification 3.47% (6/173) 3.0 0.000115 0.000872
GO:0008152 metabolic process 23.7% (41/173) 0.84 0.000127 0.000938
GO:0005524 ATP binding 12.14% (21/173) 1.24 0.000225 0.001612
GO:0043248 proteasome assembly 1.16% (2/173) 6.01 0.000407 0.002847
GO:0035639 purine ribonucleoside triphosphate binding 12.72% (22/173) 1.13 0.000455 0.003108
GO:0043168 anion binding 15.03% (26/173) 1.01 0.000505 0.003367
GO:0036094 small molecule binding 15.03% (26/173) 0.97 0.000786 0.005116
GO:0032559 adenyl ribonucleotide binding 12.72% (22/173) 1.07 0.000836 0.00532
GO:0005515 protein binding 13.29% (23/173) 1.0 0.001205 0.007497
GO:0032555 purine ribonucleotide binding 13.29% (23/173) 0.98 0.001422 0.008655
GO:0032553 ribonucleotide binding 13.29% (23/173) 0.97 0.001546 0.009212
GO:0097367 carbohydrate derivative binding 13.29% (23/173) 0.96 0.001624 0.009472
GO:0030554 adenyl nucleotide binding 12.72% (22/173) 0.98 0.001751 0.010007
GO:0004175 endopeptidase activity 2.31% (4/173) 2.84 0.002479 0.013881
GO:0017076 purine nucleotide binding 13.29% (23/173) 0.9 0.002833 0.015556
GO:0004176 ATP-dependent peptidase activity 1.16% (2/173) 4.42 0.003904 0.021023
GO:0043167 ion binding 18.5% (32/173) 0.69 0.004195 0.02216
GO:0003674 molecular_function 46.82% (81/173) 0.35 0.004424 0.022941
GO:0000166 nucleotide binding 13.29% (23/173) 0.84 0.004855 0.024273
GO:1901265 nucleoside phosphate binding 13.29% (23/173) 0.84 0.004855 0.024273
GO:0004527 exonuclease activity 1.16% (2/173) 4.17 0.005513 0.027081
GO:0140096 catalytic activity, acting on a protein 11.56% (20/173) 0.88 0.006063 0.029269
GO:0004819 glutamine-tRNA ligase activity 0.58% (1/173) 6.81 0.008873 0.040727
GO:0006425 glutaminyl-tRNA aminoacylation 0.58% (1/173) 6.81 0.008873 0.040727
GO:0019842 vitamin binding 1.73% (3/173) 2.84 0.008613 0.040874
GO:0004518 nuclease activity 1.73% (3/173) 2.73 0.010752 0.048556
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_21 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_127 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_128 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_154 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_181 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_219 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_1 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_10 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_11 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_15 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_18 0.015 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_29 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_33 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_35 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_36 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_39 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_53 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_60 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_62 0.016 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_84 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_85 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_86 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_93 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_109 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_122 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_134 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_144 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_161 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_163 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_175 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_187 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_189 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_193 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_200 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_211 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_218 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_219 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_220 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_109 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_128 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_146 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_155 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (173) (download table)

InterPro Domains

GO Terms

Family Terms