Coexpression cluster: Cluster_116 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 32.94% (28/85) 2.22 0.0 0.0
GO:0003723 RNA binding 15.29% (13/85) 3.66 0.0 0.0
GO:0097159 organic cyclic compound binding 37.65% (32/85) 1.63 0.0 0.0
GO:1901363 heterocyclic compound binding 37.65% (32/85) 1.63 0.0 0.0
GO:0005634 nucleus 9.41% (8/85) 4.47 0.0 0.0
GO:0043231 intracellular membrane-bounded organelle 9.41% (8/85) 4.23 0.0 0.0
GO:0043227 membrane-bounded organelle 9.41% (8/85) 4.23 0.0 0.0
GO:0016070 RNA metabolic process 11.76% (10/85) 3.56 0.0 0.0
GO:0034470 ncRNA processing 7.06% (6/85) 5.27 0.0 0.0
GO:0006364 rRNA processing 5.88% (5/85) 5.79 0.0 1e-06
GO:0016072 rRNA metabolic process 5.88% (5/85) 5.79 0.0 1e-06
GO:0006396 RNA processing 8.24% (7/85) 4.35 0.0 1e-06
GO:0043226 organelle 11.76% (10/85) 3.12 0.0 3e-06
GO:0043229 intracellular organelle 11.76% (10/85) 3.12 0.0 3e-06
GO:0005488 binding 43.53% (37/85) 1.19 0.0 3e-06
GO:0034660 ncRNA metabolic process 7.06% (6/85) 4.36 1e-06 7e-06
GO:0006139 nucleobase-containing compound metabolic process 12.94% (11/85) 2.57 2e-06 2.9e-05
GO:0046483 heterocycle metabolic process 12.94% (11/85) 2.48 4e-06 4.5e-05
GO:0006725 cellular aromatic compound metabolic process 12.94% (11/85) 2.48 4e-06 4.5e-05
GO:0035639 purine ribonucleoside triphosphate binding 16.47% (14/85) 2.09 4e-06 5e-05
GO:0005524 ATP binding 15.29% (13/85) 2.17 6e-06 5.1e-05
GO:0090304 nucleic acid metabolic process 11.76% (10/85) 2.61 6e-06 5.2e-05
GO:1901360 organic cyclic compound metabolic process 12.94% (11/85) 2.45 5e-06 5.2e-05
GO:0032555 purine ribonucleotide binding 16.47% (14/85) 2.02 8e-06 7.1e-05
GO:0032553 ribonucleotide binding 16.47% (14/85) 2.0 9e-06 7.6e-05
GO:0097367 carbohydrate derivative binding 16.47% (14/85) 1.99 1e-05 7.8e-05
GO:0032559 adenyl ribonucleotide binding 15.29% (13/85) 2.08 1.1e-05 8.5e-05
GO:0034641 cellular nitrogen compound metabolic process 14.12% (12/85) 2.19 1.2e-05 8.7e-05
GO:0017076 purine nucleotide binding 16.47% (14/85) 1.93 1.7e-05 0.000117
GO:0030554 adenyl nucleotide binding 15.29% (13/85) 1.98 2.3e-05 0.000154
GO:0043168 anion binding 16.47% (14/85) 1.86 2.6e-05 0.000174
GO:1901265 nucleoside phosphate binding 16.47% (14/85) 1.85 2.8e-05 0.000177
GO:0000166 nucleotide binding 16.47% (14/85) 1.85 2.8e-05 0.000177
GO:0036094 small molecule binding 16.47% (14/85) 1.8 4.2e-05 0.000255
GO:0003674 molecular_function 48.24% (41/85) 0.71 0.000218 0.001276
GO:0019843 rRNA binding 2.35% (2/85) 5.22 0.001314 0.007481
GO:0043167 ion binding 18.82% (16/85) 1.16 0.001769 0.009799
GO:0003922 GMP synthase (glutamine-hydrolyzing) activity 1.18% (1/85) 8.68 0.002437 0.012186
GO:0006177 GMP biosynthetic process 1.18% (1/85) 8.68 0.002437 0.012186
GO:0046037 GMP metabolic process 1.18% (1/85) 8.68 0.002437 0.012186
GO:0000387 spliceosomal snRNP assembly 1.18% (1/85) 8.68 0.002437 0.012186
GO:1990904 ribonucleoprotein complex 2.35% (2/85) 4.43 0.003898 0.019028
GO:0005732 sno(s)RNA-containing ribonucleoprotein complex 1.18% (1/85) 7.68 0.004869 0.020793
GO:0008186 ATP-dependent activity, acting on RNA 1.18% (1/85) 7.68 0.004869 0.020793
GO:0003724 RNA helicase activity 1.18% (1/85) 7.68 0.004869 0.020793
GO:0034457 Mpp10 complex 1.18% (1/85) 7.68 0.004869 0.020793
GO:0030490 maturation of SSU-rRNA 1.18% (1/85) 7.68 0.004869 0.020793
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 1.18% (1/85) 7.68 0.004869 0.020793
GO:0110165 cellular anatomical entity 11.76% (10/85) 1.32 0.006497 0.027182
GO:0065003 protein-containing complex assembly 2.35% (2/85) 4.01 0.006927 0.028401
GO:0005575 cellular_component 12.94% (11/85) 1.22 0.007237 0.029088
GO:0044237 cellular metabolic process 14.12% (12/85) 1.14 0.007943 0.031313
GO:0070006 metalloaminopeptidase activity 1.18% (1/85) 6.68 0.009714 0.03556
GO:0005730 nucleolus 1.18% (1/85) 6.68 0.009714 0.03556
GO:0030515 snoRNA binding 1.18% (1/85) 6.68 0.009714 0.03556
GO:0034654 nucleobase-containing compound biosynthetic process 3.53% (3/85) 2.78 0.009652 0.037332
GO:0006807 nitrogen compound metabolic process 15.29% (13/85) 1.02 0.01091 0.037906
GO:0043933 protein-containing complex organization 2.35% (2/85) 3.68 0.010731 0.037929
GO:0022607 cellular component assembly 2.35% (2/85) 3.68 0.010731 0.037929
GO:0071826 protein-RNA complex organization 1.18% (1/85) 6.36 0.012128 0.0401
GO:0030145 manganese ion binding 1.18% (1/85) 6.36 0.012128 0.0401
GO:0022618 protein-RNA complex assembly 1.18% (1/85) 6.36 0.012128 0.0401
GO:0009124 nucleoside monophosphate biosynthetic process 1.18% (1/85) 6.1 0.014536 0.04082
GO:0009161 ribonucleoside monophosphate metabolic process 1.18% (1/85) 6.1 0.014536 0.04082
GO:0009167 purine ribonucleoside monophosphate metabolic process 1.18% (1/85) 6.1 0.014536 0.04082
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 1.18% (1/85) 6.1 0.014536 0.04082
GO:0009126 purine nucleoside monophosphate metabolic process 1.18% (1/85) 6.1 0.014536 0.04082
GO:0008235 metalloexopeptidase activity 1.18% (1/85) 6.1 0.014536 0.04082
GO:0009123 nucleoside monophosphate metabolic process 1.18% (1/85) 6.1 0.014536 0.04082
GO:0009127 purine nucleoside monophosphate biosynthetic process 1.18% (1/85) 6.1 0.014536 0.04082
GO:0009156 ribonucleoside monophosphate biosynthetic process 1.18% (1/85) 6.1 0.014536 0.04082
GO:0018130 heterocycle biosynthetic process 3.53% (3/85) 2.52 0.015759 0.043657
GO:0004177 aminopeptidase activity 1.18% (1/85) 5.87 0.016938 0.046298
GO:0019438 aromatic compound biosynthetic process 3.53% (3/85) 2.57 0.014253 0.046378
GO:0043170 macromolecule metabolic process 14.12% (12/85) 1.02 0.014493 0.046424
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_36 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_121 0.022 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_129 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_134 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_138 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_235 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_270 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_278 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_47 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_87 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_150 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_179 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_207 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_2 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_4 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_14 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_16 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_18 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_20 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_24 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_25 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_27 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_32 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_33 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_34 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_45 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_51 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_64 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_65 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_68 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_71 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_73 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_74 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_75 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_83 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_88 0.018 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_90 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_91 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_93 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_94 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_96 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_105 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_108 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_113 0.016 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_120 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_121 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_151 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_154 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_185 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_193 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_197 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_198 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_214 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_216 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_228 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_233 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_234 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_269 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_275 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_314 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_356 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_421 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_658 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_871 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (85) (download table)

InterPro Domains

GO Terms

Family Terms