ID | Label | % in cluster | Enrichment log2 | p-value | Corrected p-value |
---|---|---|---|---|---|
GO:0006396 | RNA processing | 20.83% (10/48) | 5.69 | 0.0 | 0.0 |
GO:0016070 | RNA metabolic process | 22.92% (11/48) | 4.52 | 0.0 | 0.0 |
GO:0006364 | rRNA processing | 12.5% (6/48) | 6.88 | 0.0 | 0.0 |
GO:0016072 | rRNA metabolic process | 12.5% (6/48) | 6.88 | 0.0 | 0.0 |
GO:0003723 | RNA binding | 20.83% (10/48) | 4.11 | 0.0 | 0.0 |
GO:0034470 | ncRNA processing | 12.5% (6/48) | 6.09 | 0.0 | 0.0 |
GO:0034641 | cellular nitrogen compound metabolic process | 27.08% (13/48) | 3.13 | 0.0 | 0.0 |
GO:0090304 | nucleic acid metabolic process | 22.92% (11/48) | 3.57 | 0.0 | 0.0 |
GO:0006139 | nucleobase-containing compound metabolic process | 22.92% (11/48) | 3.39 | 0.0 | 0.0 |
GO:0006725 | cellular aromatic compound metabolic process | 22.92% (11/48) | 3.3 | 0.0 | 0.0 |
GO:0046483 | heterocycle metabolic process | 22.92% (11/48) | 3.3 | 0.0 | 0.0 |
GO:0005488 | binding | 56.25% (27/48) | 1.56 | 0.0 | 0.0 |
GO:1901360 | organic cyclic compound metabolic process | 22.92% (11/48) | 3.27 | 0.0 | 0.0 |
GO:0034660 | ncRNA metabolic process | 12.5% (6/48) | 5.18 | 0.0 | 0.0 |
GO:0019843 | rRNA binding | 8.33% (4/48) | 7.05 | 0.0 | 0.0 |
GO:1901363 | heterocyclic compound binding | 39.58% (19/48) | 1.71 | 1e-06 | 8e-06 |
GO:0097159 | organic cyclic compound binding | 39.58% (19/48) | 1.71 | 1e-06 | 8e-06 |
GO:0042254 | ribosome biogenesis | 6.25% (3/48) | 6.84 | 2e-06 | 1.3e-05 |
GO:0003674 | molecular_function | 62.5% (30/48) | 1.08 | 2e-06 | 1.4e-05 |
GO:0043170 | macromolecule metabolic process | 29.17% (14/48) | 2.07 | 3e-06 | 1.6e-05 |
GO:0022613 | ribonucleoprotein complex biogenesis | 6.25% (3/48) | 6.7 | 3e-06 | 1.6e-05 |
GO:0003676 | nucleic acid binding | 29.17% (14/48) | 2.05 | 4e-06 | 1.7e-05 |
GO:0044085 | cellular component biogenesis | 6.25% (3/48) | 6.57 | 4e-06 | 2e-05 |
GO:0044237 | cellular metabolic process | 27.08% (13/48) | 2.08 | 7e-06 | 3.1e-05 |
GO:0006807 | nitrogen compound metabolic process | 29.17% (14/48) | 1.95 | 8e-06 | 3.3e-05 |
GO:0009987 | cellular process | 31.25% (15/48) | 1.69 | 3.1e-05 | 0.000127 |
GO:0044238 | primary metabolic process | 29.17% (14/48) | 1.7 | 5.3e-05 | 0.000206 |
GO:0032040 | small-subunit processome | 4.17% (2/48) | 7.5 | 5.2e-05 | 0.000207 |
GO:0030684 | preribosome | 4.17% (2/48) | 7.34 | 6.6e-05 | 0.000247 |
GO:0071704 | organic substance metabolic process | 29.17% (14/48) | 1.66 | 7.7e-05 | 0.000276 |
GO:0008152 | metabolic process | 29.17% (14/48) | 1.55 | 0.000169 | 0.00059 |
GO:0017111 | ribonucleoside triphosphate phosphatase activity | 8.33% (4/48) | 3.63 | 0.00031 | 0.001046 |
GO:0016462 | pyrophosphatase activity | 8.33% (4/48) | 3.54 | 0.000386 | 0.001262 |
GO:0016817 | hydrolase activity, acting on acid anhydrides | 8.33% (4/48) | 3.5 | 0.000434 | 0.001341 |
GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 8.33% (4/48) | 3.5 | 0.000428 | 0.00136 |
GO:0043226 | organelle | 10.42% (5/48) | 2.95 | 0.000467 | 0.001363 |
GO:0043229 | intracellular organelle | 10.42% (5/48) | 2.95 | 0.000467 | 0.001363 |
GO:0005634 | nucleus | 6.25% (3/48) | 3.88 | 0.001126 | 0.003201 |
GO:1990904 | ribonucleoprotein complex | 4.17% (2/48) | 5.26 | 0.001263 | 0.003499 |
GO:0032561 | guanyl ribonucleotide binding | 6.25% (3/48) | 3.77 | 0.001409 | 0.003711 |
GO:0005525 | GTP binding | 6.25% (3/48) | 3.77 | 0.001409 | 0.003711 |
GO:0019001 | guanyl nucleotide binding | 6.25% (3/48) | 3.73 | 0.001512 | 0.003888 |
GO:0008150 | biological_process | 33.33% (16/48) | 1.11 | 0.001675 | 0.004207 |
GO:0043227 | membrane-bounded organelle | 6.25% (3/48) | 3.64 | 0.00182 | 0.004367 |
GO:0043231 | intracellular membrane-bounded organelle | 6.25% (3/48) | 3.64 | 0.00182 | 0.004367 |
GO:0005515 | protein binding | 16.67% (8/48) | 1.76 | 0.002197 | 0.005159 |
GO:0035639 | purine ribonucleoside triphosphate binding | 14.58% (7/48) | 1.92 | 0.002306 | 0.0053 |
GO:0032555 | purine ribonucleotide binding | 14.58% (7/48) | 1.84 | 0.003134 | 0.007052 |
GO:0032553 | ribonucleotide binding | 14.58% (7/48) | 1.83 | 0.003309 | 0.007293 |
GO:0097367 | carbohydrate derivative binding | 14.58% (7/48) | 1.82 | 0.003425 | 0.007398 |
GO:0017076 | purine nucleotide binding | 14.58% (7/48) | 1.75 | 0.004407 | 0.009334 |
GO:0005575 | cellular_component | 16.67% (8/48) | 1.59 | 0.004569 | 0.00949 |
GO:1901265 | nucleoside phosphate binding | 14.58% (7/48) | 1.68 | 0.005745 | 0.010886 |
GO:0000166 | nucleotide binding | 14.58% (7/48) | 1.68 | 0.005745 | 0.010886 |
GO:0071840 | cellular component organization or biogenesis | 6.25% (3/48) | 3.06 | 0.005591 | 0.010978 |
GO:0043168 | anion binding | 14.58% (7/48) | 1.69 | 0.005535 | 0.011069 |
GO:0008097 | 5S rRNA binding | 2.08% (1/48) | 7.5 | 0.005494 | 0.011196 |
GO:0036094 | small molecule binding | 14.58% (7/48) | 1.63 | 0.006979 | 0.012776 |
GO:0005759 | mitochondrial matrix | 2.08% (1/48) | 7.18 | 0.006863 | 0.01278 |
GO:0070013 | intracellular organelle lumen | 2.08% (1/48) | 6.92 | 0.00823 | 0.014337 |
GO:0031974 | membrane-enclosed lumen | 2.08% (1/48) | 6.92 | 0.00823 | 0.014337 |
GO:0043233 | organelle lumen | 2.08% (1/48) | 6.92 | 0.00823 | 0.014337 |
GO:0003924 | GTPase activity | 4.17% (2/48) | 3.68 | 0.010651 | 0.018259 |
GO:0016887 | ATP hydrolysis activity | 4.17% (2/48) | 3.59 | 0.012135 | 0.020477 |
GO:0004176 | ATP-dependent peptidase activity | 2.08% (1/48) | 6.18 | 0.01368 | 0.02273 |
GO:0008168 | methyltransferase activity | 4.17% (2/48) | 3.18 | 0.020553 | 0.033632 |
GO:0016741 | transferase activity, transferring one-carbon groups | 4.17% (2/48) | 3.11 | 0.02251 | 0.036284 |
GO:0110165 | cellular anatomical entity | 12.5% (6/48) | 1.41 | 0.024262 | 0.038534 |
GO:0001522 | pseudouridine synthesis | 2.08% (1/48) | 5.18 | 0.027177 | 0.042538 |
Clade | % in cluster | Enrichment log2 | p-value | Corrected p-value | Gene Family Method |
---|---|---|---|---|---|
No enriched Clades found |
Species | Clustering Method | Target | Jaccard index | Gene Family Method (for comparison) | Actions |
---|---|---|---|---|---|
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_36 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_57 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_94 | 0.019 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_138 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_151 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_235 | 0.022 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_327 | 0.013 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_39 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_55 | 0.011 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_58 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_99 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_179 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_324 | 0.013 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_16 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_43 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_98 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_116 | 0.016 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |