Coexpression cluster: Cluster_27 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016859 cis-trans isomerase activity 2.76% (6/217) 3.99 2e-06 0.000449
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 2.76% (6/217) 3.99 2e-06 0.000449
GO:0098800 inner mitochondrial membrane protein complex 1.84% (4/217) 4.27 5.5e-05 0.002752
GO:0009142 nucleoside triphosphate biosynthetic process 1.84% (4/217) 4.27 5.5e-05 0.002752
GO:0009201 ribonucleoside triphosphate biosynthetic process 1.84% (4/217) 4.27 5.5e-05 0.002752
GO:0006754 ATP biosynthetic process 1.84% (4/217) 4.27 5.5e-05 0.002752
GO:0009145 purine nucleoside triphosphate biosynthetic process 1.84% (4/217) 4.27 5.5e-05 0.002752
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 1.84% (4/217) 4.27 5.5e-05 0.002752
GO:0009144 purine nucleoside triphosphate metabolic process 1.84% (4/217) 4.03 0.000106 0.002829
GO:0009199 ribonucleoside triphosphate metabolic process 1.84% (4/217) 4.03 0.000106 0.002829
GO:0046034 ATP metabolic process 1.84% (4/217) 4.03 0.000106 0.002829
GO:0009205 purine ribonucleoside triphosphate metabolic process 1.84% (4/217) 4.03 0.000106 0.002829
GO:0009141 nucleoside triphosphate metabolic process 1.84% (4/217) 4.0 0.000115 0.002887
GO:0018208 peptidyl-proline modification 1.84% (4/217) 4.17 7.4e-05 0.002959
GO:0000413 protein peptidyl-prolyl isomerization 1.84% (4/217) 4.17 7.4e-05 0.002959
GO:0006091 generation of precursor metabolites and energy 2.3% (5/217) 3.37 0.000129 0.003046
GO:0009260 ribonucleotide biosynthetic process 1.84% (4/217) 3.86 0.000171 0.00327
GO:0046390 ribose phosphate biosynthetic process 1.84% (4/217) 3.86 0.000171 0.00327
GO:0009152 purine ribonucleotide biosynthetic process 1.84% (4/217) 3.86 0.000171 0.00327
GO:0005783 endoplasmic reticulum 1.38% (3/217) 4.75 0.000182 0.003335
GO:0022900 electron transport chain 1.38% (3/217) 4.82 0.000157 0.003507
GO:0098798 mitochondrial protein-containing complex 1.84% (4/217) 4.07 9.7e-05 0.003537
GO:0006164 purine nucleotide biosynthetic process 1.84% (4/217) 3.54 0.000405 0.007076
GO:0009150 purine ribonucleotide metabolic process 1.84% (4/217) 3.43 0.000537 0.00771
GO:0009259 ribonucleotide metabolic process 1.84% (4/217) 3.43 0.000537 0.00771
GO:0019693 ribose phosphate metabolic process 1.84% (4/217) 3.43 0.000537 0.00771
GO:0072522 purine-containing compound biosynthetic process 1.84% (4/217) 3.47 0.000481 0.008056
GO:0016853 isomerase activity 2.76% (6/217) 2.6 0.000514 0.008257
GO:0015986 proton motive force-driven ATP synthesis 1.38% (3/217) 4.1 0.000714 0.009902
GO:0018193 peptidyl-amino acid modification 1.84% (4/217) 3.27 0.000808 0.010831
GO:1901293 nucleoside phosphate biosynthetic process 1.84% (4/217) 3.24 0.000889 0.011166
GO:0009165 nucleotide biosynthetic process 1.84% (4/217) 3.24 0.000889 0.011166
GO:0019646 aerobic electron transport chain 0.92% (2/217) 5.24 0.001226 0.013318
GO:0015980 energy derivation by oxidation of organic compounds 0.92% (2/217) 5.24 0.001226 0.013318
GO:0009060 aerobic respiration 0.92% (2/217) 5.24 0.001226 0.013318
GO:0045333 cellular respiration 0.92% (2/217) 5.24 0.001226 0.013318
GO:0006163 purine nucleotide metabolic process 1.84% (4/217) 3.1 0.001268 0.013415
GO:1901137 carbohydrate derivative biosynthetic process 1.84% (4/217) 3.13 0.001164 0.014183
GO:0072521 purine-containing compound metabolic process 1.84% (4/217) 3.05 0.001436 0.014797
GO:1901135 carbohydrate derivative metabolic process 2.3% (5/217) 2.57 0.001646 0.016545
GO:0022904 respiratory electron transport chain 0.92% (2/217) 4.86 0.002102 0.020615
GO:0009117 nucleotide metabolic process 1.84% (4/217) 2.84 0.002424 0.0232
GO:0006753 nucleoside phosphate metabolic process 1.84% (4/217) 2.83 0.002509 0.023453
GO:0005741 mitochondrial outer membrane 0.92% (2/217) 4.65 0.002811 0.024562
GO:0070069 cytochrome complex 0.92% (2/217) 4.65 0.002811 0.024562
GO:0031968 organelle outer membrane 0.92% (2/217) 4.65 0.002811 0.024562
GO:0072593 reactive oxygen species metabolic process 0.92% (2/217) 4.47 0.003615 0.029658
GO:0006801 superoxide metabolic process 0.92% (2/217) 4.47 0.003615 0.029658
GO:0005739 mitochondrion 0.92% (2/217) 4.47 0.003615 0.029658
GO:0098796 membrane protein complex 2.76% (6/217) 2.02 0.003899 0.030737
GO:0140662 ATP-dependent protein folding chaperone 1.38% (3/217) 3.26 0.003847 0.030928
GO:0098803 respiratory chain complex 0.92% (2/217) 4.39 0.004053 0.031331
GO:0055086 nucleobase-containing small molecule metabolic process 1.84% (4/217) 2.59 0.004527 0.033704
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) 0.92% (2/217) 4.31 0.004514 0.034236
GO:0044183 protein folding chaperone 1.38% (3/217) 3.14 0.004835 0.035342
GO:0005048 signal sequence binding 0.92% (2/217) 4.17 0.005505 0.038823
GO:0042277 peptide binding 0.92% (2/217) 4.17 0.005505 0.038823
GO:0005575 cellular_component 14.75% (32/217) 0.67 0.005821 0.040347
GO:0090407 organophosphate biosynthetic process 1.84% (4/217) 2.41 0.007075 0.048207
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_1 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_2 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_11 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_21 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_23 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_49 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_70 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_72 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_79 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_88 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_91 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_93 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_94 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_97 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_107 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_108 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_112 0.015 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_118 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_120 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_127 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_128 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_138 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_151 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_154 0.017 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_155 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_160 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_165 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_170 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_175 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_180 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_189 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_194 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_196 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_198 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_208 0.015 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_210 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_211 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_217 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_226 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_229 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_244 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_251 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_256 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_261 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_265 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_272 0.015 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_29 0.017 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_1 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_53 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (217) (download table)

InterPro Domains

GO Terms

Family Terms