Coexpression cluster: Cluster_154 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016070 RNA metabolic process 10.71% (6/56) 3.42 2e-05 0.003812
GO:0003723 RNA binding 10.71% (6/56) 3.15 5.8e-05 0.005415
GO:1901360 organic cyclic compound metabolic process 12.5% (7/56) 2.4 0.000345 0.016026
GO:0046483 heterocycle metabolic process 12.5% (7/56) 2.43 0.000306 0.018996
GO:0097159 organic cyclic compound binding 26.79% (15/56) 1.14 0.002207 0.020528
GO:1901363 heterocyclic compound binding 26.79% (15/56) 1.14 0.002207 0.020528
GO:0019001 guanyl nucleotide binding 5.36% (3/56) 3.51 0.002357 0.02088
GO:0006807 nitrogen compound metabolic process 19.64% (11/56) 1.38 0.002731 0.021166
GO:0005737 cytoplasm 3.57% (2/56) 4.48 0.003689 0.021442
GO:0034062 5'-3' RNA polymerase activity 3.57% (2/56) 4.55 0.003311 0.021995
GO:0097747 RNA polymerase activity 3.57% (2/56) 4.55 0.003311 0.021995
GO:0090304 nucleic acid metabolic process 10.71% (6/56) 2.48 0.000712 0.022061
GO:0017076 purine nucleotide binding 14.29% (8/56) 1.72 0.002731 0.022084
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 3.57% (2/56) 4.73 0.002613 0.022096
GO:1901265 nucleoside phosphate binding 14.29% (8/56) 1.65 0.003683 0.022099
GO:0000166 nucleotide binding 14.29% (8/56) 1.65 0.003683 0.022099
GO:0016779 nucleotidyltransferase activity 5.36% (3/56) 4.2 0.000602 0.022379
GO:0043168 anion binding 14.29% (8/56) 1.66 0.003531 0.022649
GO:0032561 guanyl ribonucleotide binding 5.36% (3/56) 3.55 0.002198 0.022713
GO:0005525 GTP binding 5.36% (3/56) 3.55 0.002198 0.022713
GO:0008186 ATP-dependent activity, acting on RNA 1.79% (1/56) 8.28 0.003209 0.022956
GO:0003724 RNA helicase activity 1.79% (1/56) 8.28 0.003209 0.022956
GO:0097367 carbohydrate derivative binding 14.29% (8/56) 1.79 0.002054 0.023876
GO:0032553 ribonucleotide binding 14.29% (8/56) 1.8 0.001975 0.024493
GO:0006725 cellular aromatic compound metabolic process 10.71% (6/56) 2.21 0.001864 0.024766
GO:0034641 cellular nitrogen compound metabolic process 12.5% (7/56) 2.01 0.001647 0.025529
GO:0036094 small molecule binding 14.29% (8/56) 1.6 0.004587 0.025854
GO:0043170 macromolecule metabolic process 17.86% (10/56) 1.36 0.004874 0.025903
GO:0005488 binding 37.5% (21/56) 0.98 0.000976 0.025935
GO:0018130 heterocycle biosynthetic process 5.36% (3/56) 3.12 0.005036 0.026021
GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 1.79% (1/56) 7.7 0.00481 0.026311
GO:0032555 purine ribonucleotide binding 14.29% (8/56) 1.81 0.001858 0.026581
GO:0003676 nucleic acid binding 19.64% (11/56) 1.48 0.001621 0.027415
GO:0006139 nucleobase-containing compound metabolic process 10.71% (6/56) 2.3 0.001351 0.027913
GO:0004386 helicase activity 3.57% (2/56) 4.13 0.005862 0.029467
GO:0019008 molybdopterin synthase complex 1.79% (1/56) 9.28 0.001606 0.029867
GO:1901362 organic cyclic compound biosynthetic process 5.36% (3/56) 2.99 0.006438 0.029936
GO:0035639 purine ribonucleoside triphosphate binding 14.29% (8/56) 1.89 0.001313 0.030534
GO:0006777 Mo-molybdopterin cofactor biosynthetic process 1.79% (1/56) 7.28 0.006408 0.03056
GO:0019720 Mo-molybdopterin cofactor metabolic process 1.79% (1/56) 7.28 0.006408 0.03056
GO:0051189 prosthetic group metabolic process 1.79% (1/56) 6.96 0.008003 0.032362
GO:0051539 4 iron, 4 sulfur cluster binding 1.79% (1/56) 6.96 0.008003 0.032362
GO:0043545 molybdopterin cofactor metabolic process 1.79% (1/56) 6.96 0.008003 0.032362
GO:0000956 nuclear-transcribed mRNA catabolic process 1.79% (1/56) 6.96 0.008003 0.032362
GO:0032324 molybdopterin cofactor biosynthetic process 1.79% (1/56) 6.96 0.008003 0.032362
GO:0006402 mRNA catabolic process 1.79% (1/56) 6.96 0.008003 0.032362
GO:0044237 cellular metabolic process 16.07% (9/56) 1.32 0.008893 0.034461
GO:0006351 DNA-templated transcription 3.57% (2/56) 3.82 0.008874 0.035118
GO:0006401 RNA catabolic process 1.79% (1/56) 6.7 0.009597 0.036428
GO:0003674 molecular_function 44.64% (25/56) 0.59 0.011838 0.044036
GO:0032040 small-subunit processome 1.79% (1/56) 6.28 0.012775 0.045696
GO:0071704 organic substance metabolic process 19.64% (11/56) 1.09 0.0126 0.045951
GO:0030684 preribosome 1.79% (1/56) 6.11 0.014361 0.049465
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_32 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_50 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_56 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_70 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_134 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_232 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_240 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_279 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_62 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_133 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_170 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_199 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_220 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_238 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_1 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_5 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_9 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_14 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_18 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_19 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_20 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_28 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_38 0.015 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_39 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_47 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_65 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_67 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_68 0.016 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_71 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_74 0.015 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_86 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_88 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_90 0.019 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_92 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_94 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_96 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_116 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_121 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_122 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_146 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_153 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_155 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_173 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_185 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_197 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_250 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_305 0.017 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_154 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (56) (download table)

InterPro Domains

GO Terms

Family Terms