Coexpression cluster: Cluster_238 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0007010 cytoskeleton organization 3.12% (2/64) 5.86 0.000548 0.020593
GO:0004743 pyruvate kinase activity 3.12% (2/64) 5.93 0.000496 0.02176
GO:0031420 alkali metal ion binding 3.12% (2/64) 5.93 0.000496 0.02176
GO:0030955 potassium ion binding 3.12% (2/64) 5.93 0.000496 0.02176
GO:0009987 cellular process 31.25% (20/64) 1.17 0.00029 0.025454
GO:0003674 molecular_function 59.38% (38/64) 0.69 0.000203 0.026758
GO:0005488 binding 43.75% (28/64) 0.97 0.000118 0.031064
GO:0006082 organic acid metabolic process 6.25% (4/64) 2.92 0.001979 0.032536
GO:0019752 carboxylic acid metabolic process 6.25% (4/64) 2.92 0.001957 0.034316
GO:0043436 oxoacid metabolic process 6.25% (4/64) 2.92 0.001957 0.034316
GO:0140658 ATP-dependent chromatin remodeler activity 3.12% (2/64) 5.04 0.001709 0.037457
GO:0016773 phosphotransferase activity, alcohol group as acceptor 14.06% (9/64) 1.67 0.001893 0.038297
GO:0008094 ATP-dependent activity, acting on DNA 3.12% (2/64) 4.29 0.004726 0.038842
GO:0000313 organellar ribosome 1.56% (1/64) 9.25 0.001645 0.039326
GO:0005761 mitochondrial ribosome 1.56% (1/64) 9.25 0.001645 0.039326
GO:0043412 macromolecule modification 14.06% (9/64) 1.48 0.004652 0.039466
GO:0044237 cellular metabolic process 21.88% (14/64) 1.29 0.001352 0.039502
GO:0044238 primary metabolic process 25.0% (16/64) 1.08 0.002562 0.039636
GO:0006096 glycolytic process 3.12% (2/64) 4.69 0.002745 0.040105
GO:0008652 amino acid biosynthetic process 3.12% (2/64) 4.32 0.004578 0.040137
GO:0009056 catabolic process 4.69% (3/64) 3.19 0.004427 0.040146
GO:1901575 organic substance catabolic process 4.69% (3/64) 3.23 0.004125 0.040183
GO:0016052 carbohydrate catabolic process 3.12% (2/64) 4.37 0.00429 0.040293
GO:0016772 transferase activity, transferring phosphorus-containing groups 14.06% (9/64) 1.51 0.003999 0.040452
GO:0036211 protein modification process 14.06% (9/64) 1.52 0.003878 0.040792
GO:0003724 RNA helicase activity 1.56% (1/64) 8.25 0.003287 0.041166
GO:0008186 ATP-dependent activity, acting on RNA 1.56% (1/64) 8.25 0.003287 0.041166
GO:0016740 transferase activity 18.75% (12/64) 1.2 0.005192 0.041376
GO:0071704 organic substance metabolic process 25.0% (16/64) 1.03 0.003779 0.041414
GO:0006807 nitrogen compound metabolic process 21.88% (14/64) 1.17 0.003002 0.041558
GO:0006090 pyruvate metabolic process 3.12% (2/64) 4.52 0.003477 0.041564
GO:0140640 catalytic activity, acting on a nucleic acid 6.25% (4/64) 2.66 0.003723 0.042571
GO:0008150 biological_process 39.06% (25/64) 0.84 0.001304 0.042858
GO:0097159 organic cyclic compound binding 25.0% (16/64) 0.86 0.011694 0.045228
GO:1901363 heterocyclic compound binding 25.0% (16/64) 0.86 0.011694 0.045228
GO:0007265 Ras protein signal transduction 1.56% (1/64) 6.44 0.011458 0.045658
GO:0007266 Rho protein signal transduction 1.56% (1/64) 6.44 0.011458 0.045658
GO:0006401 RNA catabolic process 1.56% (1/64) 6.44 0.011458 0.045658
GO:0046855 obsolete inositol phosphate dephosphorylation 1.56% (1/64) 6.44 0.011458 0.045658
GO:0005094 Rho GDP-dissociation inhibitor activity 1.56% (1/64) 6.44 0.011458 0.045658
GO:0015631 tubulin binding 3.12% (2/64) 3.59 0.012113 0.046171
GO:0003824 catalytic activity 31.25% (20/64) 0.75 0.009891 0.046453
GO:0008017 microtubule binding 3.12% (2/64) 3.72 0.010136 0.046769
GO:0000226 microtubule cytoskeleton organization 1.56% (1/64) 6.66 0.009829 0.047001
GO:0006558 L-phenylalanine metabolic process 1.56% (1/64) 6.66 0.009829 0.047001
GO:0000956 nuclear-transcribed mRNA catabolic process 1.56% (1/64) 6.66 0.009829 0.047001
GO:0009094 L-phenylalanine biosynthetic process 1.56% (1/64) 6.66 0.009829 0.047001
GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway 1.56% (1/64) 6.66 0.009829 0.047001
GO:0006402 mRNA catabolic process 1.56% (1/64) 6.66 0.009829 0.047001
GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process 1.56% (1/64) 6.66 0.009829 0.047001
GO:0004664 prephenate dehydratase activity 1.56% (1/64) 6.66 0.009829 0.047001
GO:0007051 spindle organization 1.56% (1/64) 6.66 0.009829 0.047001
GO:0030151 molybdenum ion binding 1.56% (1/64) 6.66 0.009829 0.047001
GO:0051225 spindle assembly 1.56% (1/64) 6.66 0.009829 0.047001
GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process 1.56% (1/64) 6.66 0.009829 0.047001
GO:0006996 organelle organization 3.12% (2/64) 3.69 0.010562 0.047081
GO:1901564 organonitrogen compound metabolic process 18.75% (12/64) 1.17 0.006105 0.047222
GO:0140097 catalytic activity, acting on DNA 3.12% (2/64) 3.56 0.012574 0.047241
GO:0005575 cellular_component 17.19% (11/64) 1.12 0.010893 0.047749
GO:0043170 macromolecule metabolic process 18.75% (12/64) 1.07 0.010561 0.047888
GO:0070652 HAUS complex 1.56% (1/64) 7.25 0.006563 0.047949
GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 1.56% (1/64) 7.25 0.006563 0.047949
GO:0044281 small molecule metabolic process 6.25% (4/64) 2.2 0.011291 0.048681
GO:0003677 DNA binding 9.38% (6/64) 1.82 0.006996 0.049726
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_124 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_129 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_134 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_218 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_231 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_232 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_236 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_248 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_260 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_14 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_16 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_21 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_23 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_29 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_34 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_48 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_53 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_54 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_58 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_62 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_83 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_84 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_95 0.016 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_100 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_102 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_103 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_110 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_123 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_136 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_141 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_144 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_145 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_148 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_149 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_155 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_156 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_171 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_181 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_184 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_190 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_201 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_202 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_203 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_207 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_216 0.017 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_224 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_225 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_228 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_229 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_240 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_154 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_161 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (64) (download table)

InterPro Domains

GO Terms

Family Terms