Coexpression cluster: Cluster_232 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009987 cellular process 35.48% (33/93) 1.27 1e-06 0.000176
GO:0006796 phosphate-containing compound metabolic process 16.13% (15/93) 1.83 1.9e-05 0.002102
GO:0006793 phosphorus metabolic process 16.13% (15/93) 1.83 1.9e-05 0.002102
GO:0004672 protein kinase activity 13.98% (13/93) 1.8 9e-05 0.004253
GO:0016310 phosphorylation 13.98% (13/93) 1.8 8.5e-05 0.004698
GO:0016772 transferase activity, transferring phosphorus-containing groups 15.05% (14/93) 1.66 0.000123 0.005092
GO:0016773 phosphotransferase activity, alcohol group as acceptor 13.98% (13/93) 1.73 0.000143 0.005236
GO:0006468 protein phosphorylation 13.98% (13/93) 1.81 8.1e-05 0.005367
GO:0016301 kinase activity 13.98% (13/93) 1.71 0.000166 0.00549
GO:0044237 cellular metabolic process 22.58% (21/93) 1.31 7.6e-05 0.006276
GO:0036211 protein modification process 13.98% (13/93) 1.53 0.000545 0.014991
GO:0006807 nitrogen compound metabolic process 21.51% (20/93) 1.13 0.000612 0.01553
GO:0008150 biological_process 39.78% (37/93) 0.73 0.000535 0.016054
GO:0043412 macromolecule modification 13.98% (13/93) 1.49 0.000716 0.016878
GO:0032553 ribonucleotide binding 16.13% (15/93) 1.33 0.000847 0.017468
GO:0097367 carbohydrate derivative binding 16.13% (15/93) 1.32 0.000904 0.017552
GO:0032555 purine ribonucleotide binding 16.13% (15/93) 1.34 0.000799 0.017579
GO:0035639 purine ribonucleoside triphosphate binding 15.05% (14/93) 1.36 0.001059 0.019407
GO:0017076 purine nucleotide binding 16.13% (15/93) 1.26 0.001375 0.023881
GO:0044238 primary metabolic process 23.66% (22/93) 0.96 0.001561 0.024534
GO:0043170 macromolecule metabolic process 19.35% (18/93) 1.1 0.001557 0.025691
GO:0032559 adenyl ribonucleotide binding 13.98% (13/93) 1.34 0.001806 0.02709
GO:0000166 nucleotide binding 16.13% (15/93) 1.19 0.002195 0.030175
GO:1901265 nucleoside phosphate binding 16.13% (15/93) 1.19 0.002195 0.030175
GO:0005524 ATP binding 12.9% (12/93) 1.36 0.002378 0.031383
GO:0071704 organic substance metabolic process 23.66% (22/93) 0.9 0.002672 0.032654
GO:0043168 anion binding 16.13% (15/93) 1.16 0.002655 0.0337
GO:0030554 adenyl nucleotide binding 13.98% (13/93) 1.25 0.003013 0.035505
GO:0036094 small molecule binding 16.13% (15/93) 1.12 0.003399 0.03868
GO:0140096 catalytic activity, acting on a protein 13.98% (13/93) 1.23 0.003554 0.039099
GO:0016836 hydro-lyase activity 2.15% (2/93) 4.32 0.004546 0.040546
GO:0000045 autophagosome assembly 1.08% (1/93) 7.78 0.004542 0.041635
GO:0003714 transcription corepressor activity 1.08% (1/93) 7.78 0.004542 0.041635
GO:1905037 autophagosome organization 1.08% (1/93) 7.78 0.004542 0.041635
GO:0007033 vacuole organization 1.08% (1/93) 7.78 0.004542 0.041635
GO:1901360 organic cyclic compound metabolic process 7.53% (7/93) 1.74 0.005034 0.042599
GO:0006259 DNA metabolic process 3.23% (3/93) 3.13 0.00502 0.043593
GO:0008152 metabolic process 23.66% (22/93) 0.78 0.006893 0.046425
GO:0006725 cellular aromatic compound metabolic process 7.53% (7/93) 1.77 0.004527 0.046688
GO:0022406 membrane docking 1.08% (1/93) 7.2 0.006805 0.046787
GO:0140029 exocytic process 1.08% (1/93) 7.2 0.006805 0.046787
GO:0051640 organelle localization 1.08% (1/93) 7.2 0.006805 0.046787
GO:0140056 organelle localization by membrane tethering 1.08% (1/93) 7.2 0.006805 0.046787
GO:0106068 SUMO ligase complex 1.08% (1/93) 7.2 0.006805 0.046787
GO:0030915 Smc5-Smc6 complex 1.08% (1/93) 7.2 0.006805 0.046787
GO:0006904 vesicle docking involved in exocytosis 1.08% (1/93) 7.2 0.006805 0.046787
GO:0048278 vesicle docking 1.08% (1/93) 7.2 0.006805 0.046787
GO:0016740 transferase activity 17.2% (16/93) 1.03 0.004483 0.047724
GO:0022803 passive transmembrane transporter activity 3.23% (3/93) 2.92 0.007418 0.048001
GO:0015267 channel activity 3.23% (3/93) 2.92 0.007418 0.048001
GO:0043167 ion binding 20.43% (19/93) 0.89 0.005907 0.048736
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_3 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_4 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_10 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_11 0.015 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_17 0.018 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_18 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_21 0.017 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_23 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_29 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_52 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_58 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_63 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_72 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_76 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_79 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_104 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_110 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_117 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_118 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_125 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_126 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_132 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_137 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_148 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_152 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_154 0.017 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_156 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_157 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_176 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_186 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_191 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_197 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_201 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_204 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_223 0.015 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_226 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_230 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_231 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_233 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_245 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_250 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_253 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_254 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_261 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_262 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_263 0.019 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_268 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_276 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_285 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_299 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_141 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_170 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_201 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_238 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_1 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_95 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_150 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_154 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_162 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (93) (download table)

InterPro Domains

GO Terms

Family Terms