ID | Label | % in cluster | Enrichment log2 | p-value | Corrected p-value |
---|---|---|---|---|---|
GO:0003676 | nucleic acid binding | 19.25% (36/187) | 1.91 | 0.0 | 0.0 |
GO:0003723 | RNA binding | 11.23% (21/187) | 2.72 | 0.0 | 0.0 |
GO:0005488 | binding | 41.71% (78/187) | 0.9 | 0.0 | 0.0 |
GO:0097159 | organic cyclic compound binding | 29.41% (55/187) | 1.09 | 0.0 | 2e-06 |
GO:1901363 | heterocyclic compound binding | 29.41% (55/187) | 1.09 | 0.0 | 2e-06 |
GO:0016070 | RNA metabolic process | 6.42% (12/187) | 2.47 | 2e-06 | 0.000135 |
GO:0090304 | nucleic acid metabolic process | 6.95% (13/187) | 2.17 | 7e-06 | 0.000406 |
GO:0003674 | molecular_function | 52.41% (98/187) | 0.51 | 1e-05 | 0.000465 |
GO:0006139 | nucleobase-containing compound metabolic process | 7.49% (14/187) | 1.93 | 2.2e-05 | 0.000916 |
GO:0006487 | protein N-linked glycosylation | 1.6% (3/187) | 5.38 | 4.8e-05 | 0.001805 |
GO:0046483 | heterocycle metabolic process | 7.49% (14/187) | 1.8 | 5.8e-05 | 0.001819 |
GO:0006725 | cellular aromatic compound metabolic process | 7.49% (14/187) | 1.81 | 5.5e-05 | 0.001885 |
GO:0016192 | vesicle-mediated transport | 3.74% (7/187) | 2.83 | 6.5e-05 | 0.001886 |
GO:0034660 | ncRNA metabolic process | 3.21% (6/187) | 3.07 | 8.8e-05 | 0.002232 |
GO:1901360 | organic cyclic compound metabolic process | 7.49% (14/187) | 1.75 | 8.6e-05 | 0.002319 |
GO:0043413 | macromolecule glycosylation | 2.14% (4/187) | 3.89 | 0.000156 | 0.00348 |
GO:0006486 | protein glycosylation | 2.14% (4/187) | 3.89 | 0.000156 | 0.00348 |
GO:0006399 | tRNA metabolic process | 2.67% (5/187) | 3.27 | 0.000181 | 0.003821 |
GO:0006396 | RNA processing | 3.21% (6/187) | 2.82 | 0.000226 | 0.004077 |
GO:0035639 | purine ribonucleoside triphosphate binding | 12.83% (24/187) | 1.15 | 0.000224 | 0.004244 |
GO:0070085 | glycosylation | 2.14% (4/187) | 3.77 | 0.000218 | 0.004341 |
GO:0008250 | oligosaccharyltransferase complex | 1.07% (2/187) | 5.89 | 0.000475 | 0.008181 |
GO:0098796 | membrane protein complex | 3.74% (7/187) | 2.26 | 0.00071 | 0.011698 |
GO:0030117 | membrane coat | 2.14% (4/187) | 3.24 | 0.000879 | 0.013886 |
GO:0051649 | establishment of localization in cell | 3.21% (6/187) | 2.36 | 0.001194 | 0.017402 |
GO:0046907 | intracellular transport | 3.21% (6/187) | 2.36 | 0.001194 | 0.017402 |
GO:0032991 | protein-containing complex | 5.35% (10/187) | 1.66 | 0.001379 | 0.019359 |
GO:0005524 | ATP binding | 10.7% (20/187) | 1.06 | 0.001557 | 0.02107 |
GO:0032555 | purine ribonucleotide binding | 12.83% (24/187) | 0.93 | 0.001844 | 0.024101 |
GO:0031090 | organelle membrane | 1.6% (3/187) | 3.56 | 0.002145 | 0.02463 |
GO:0034641 | cellular nitrogen compound metabolic process | 7.49% (14/187) | 1.29 | 0.002016 | 0.024649 |
GO:0097367 | carbohydrate derivative binding | 12.83% (24/187) | 0.91 | 0.002108 | 0.024972 |
GO:0006886 | intracellular protein transport | 2.67% (5/187) | 2.46 | 0.002271 | 0.025313 |
GO:0032553 | ribonucleotide binding | 12.83% (24/187) | 0.92 | 0.002007 | 0.025355 |
GO:0051641 | cellular localization | 3.21% (6/187) | 2.05 | 0.003533 | 0.038262 |
GO:0017076 | purine nucleotide binding | 12.83% (24/187) | 0.85 | 0.003695 | 0.038897 |
GO:0000176 | nuclear exosome (RNase complex) | 0.53% (1/187) | 7.7 | 0.004806 | 0.039597 |
GO:0008452 | RNA ligase activity | 0.53% (1/187) | 7.7 | 0.004806 | 0.039597 |
GO:0042030 | ATPase inhibitor activity | 0.53% (1/187) | 7.7 | 0.004806 | 0.039597 |
GO:0018279 | protein N-linked glycosylation via asparagine | 0.53% (1/187) | 7.7 | 0.004806 | 0.039597 |
GO:0001181 | RNA polymerase I general transcription initiation factor activity | 0.53% (1/187) | 7.7 | 0.004806 | 0.039597 |
GO:0006361 | transcription initiation at RNA polymerase I promoter | 0.53% (1/187) | 7.7 | 0.004806 | 0.039597 |
GO:0140223 | general transcription initiation factor activity | 0.53% (1/187) | 7.7 | 0.004806 | 0.039597 |
GO:0003972 | RNA ligase (ATP) activity | 0.53% (1/187) | 7.7 | 0.004806 | 0.039597 |
GO:0034227 | tRNA thio-modification | 0.53% (1/187) | 7.7 | 0.004806 | 0.039597 |
GO:0034470 | ncRNA processing | 1.6% (3/187) | 3.14 | 0.004912 | 0.039611 |
GO:0008135 | translation factor activity, RNA binding | 1.6% (3/187) | 2.96 | 0.006843 | 0.039897 |
GO:0090079 | translation regulator activity, nucleic acid binding | 1.6% (3/187) | 2.96 | 0.006843 | 0.039897 |
GO:0045182 | translation regulator activity | 1.6% (3/187) | 2.96 | 0.006843 | 0.039897 |
GO:0061659 | ubiquitin-like protein ligase activity | 1.07% (2/187) | 4.06 | 0.006409 | 0.040483 |
GO:0030127 | COPII vesicle coat | 1.07% (2/187) | 4.06 | 0.006409 | 0.040483 |
GO:0043167 | ion binding | 17.65% (33/187) | 0.62 | 0.007657 | 0.040872 |
GO:0015031 | protein transport | 2.67% (5/187) | 2.07 | 0.007141 | 0.041006 |
GO:0070727 | cellular macromolecule localization | 2.67% (5/187) | 2.05 | 0.007624 | 0.041276 |
GO:0033036 | macromolecule localization | 2.67% (5/187) | 2.05 | 0.007624 | 0.041276 |
GO:0045184 | establishment of protein localization | 2.67% (5/187) | 2.05 | 0.007624 | 0.041276 |
GO:0008104 | protein localization | 2.67% (5/187) | 2.05 | 0.007624 | 0.041276 |
GO:0043168 | anion binding | 12.83% (24/187) | 0.78 | 0.006667 | 0.041425 |
GO:0005515 | protein binding | 11.76% (22/187) | 0.82 | 0.006818 | 0.041679 |
GO:0043039 | tRNA aminoacylation | 1.6% (3/187) | 3.0 | 0.00638 | 0.041692 |
GO:0043038 | amino acid activation | 1.6% (3/187) | 3.0 | 0.00638 | 0.041692 |
GO:0016875 | ligase activity, forming carbon-oxygen bonds | 1.6% (3/187) | 3.0 | 0.00638 | 0.041692 |
GO:0004812 | aminoacyl-tRNA ligase activity | 1.6% (3/187) | 3.0 | 0.00638 | 0.041692 |
GO:0006418 | tRNA aminoacylation for protein translation | 1.6% (3/187) | 3.08 | 0.005513 | 0.043531 |
GO:0032780 | negative regulation of ATP-dependent activity | 0.53% (1/187) | 6.7 | 0.009589 | 0.043786 |
GO:0007031 | peroxisome organization | 0.53% (1/187) | 6.7 | 0.009589 | 0.043786 |
GO:0006370 | 7-methylguanosine mRNA capping | 0.53% (1/187) | 6.7 | 0.009589 | 0.043786 |
GO:0043462 | regulation of ATP-dependent activity | 0.53% (1/187) | 6.7 | 0.009589 | 0.043786 |
GO:0000178 | exosome (RNase complex) | 0.53% (1/187) | 6.7 | 0.009589 | 0.043786 |
GO:0004484 | mRNA guanylyltransferase activity | 0.53% (1/187) | 6.7 | 0.009589 | 0.043786 |
GO:0061630 | ubiquitin protein ligase activity | 1.07% (2/187) | 4.12 | 0.005915 | 0.043955 |
GO:0140534 | endoplasmic reticulum protein-containing complex | 1.07% (2/187) | 4.12 | 0.005915 | 0.043955 |
GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | 1.07% (2/187) | 3.75 | 0.009748 | 0.043983 |
GO:1901265 | nucleoside phosphate binding | 12.83% (24/187) | 0.79 | 0.006346 | 0.044537 |
GO:0000166 | nucleotide binding | 12.83% (24/187) | 0.79 | 0.006346 | 0.044537 |
GO:0032559 | adenyl ribonucleotide binding | 10.7% (20/187) | 0.82 | 0.010054 | 0.044828 |
GO:0009987 | cellular process | 20.86% (39/187) | 0.58 | 0.005814 | 0.044967 |
GO:0008270 | zinc ion binding | 3.74% (7/187) | 1.61 | 0.008573 | 0.045128 |
GO:0016874 | ligase activity | 2.14% (4/187) | 2.6 | 0.004415 | 0.045225 |
GO:0140098 | catalytic activity, acting on RNA | 2.67% (5/187) | 2.12 | 0.00624 | 0.045481 |
GO:0140513 | nuclear protein-containing complex | 1.6% (3/187) | 2.81 | 0.009166 | 0.045708 |
GO:0098588 | bounding membrane of organelle | 1.07% (2/187) | 3.79 | 0.009148 | 0.046228 |
GO:0008033 | tRNA processing | 1.07% (2/187) | 3.79 | 0.009148 | 0.046228 |
GO:0036094 | small molecule binding | 12.83% (24/187) | 0.74 | 0.009465 | 0.046589 |
GO:0043170 | macromolecule metabolic process | 14.44% (27/187) | 0.69 | 0.009143 | 0.047468 |
GO:0140640 | catalytic activity, acting on a nucleic acid | 3.21% (6/187) | 1.7 | 0.010966 | 0.048327 |
Clade | % in cluster | Enrichment log2 | p-value | Corrected p-value | Gene Family Method |
---|---|---|---|---|---|
No enriched Clades found |
Species | Clustering Method | Target | Jaccard index | Gene Family Method (for comparison) | Actions |
---|---|---|---|---|---|
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_155 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_216 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_10 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_15 | 0.006 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_18 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_22 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_29 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_34 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_37 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_43 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_45 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_47 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_53 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_55 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_56 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_63 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_83 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_94 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_97 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_122 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_128 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_138 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_145 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_147 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_149 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_150 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_162 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_171 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_187 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_191 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_193 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_215 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_228 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_229 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_230 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_242 | 0.013 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_268 | 0.014 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_273 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_1 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_77 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_89 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_122 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_144 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_162 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |