Coexpression cluster: Cluster_22 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005515 protein binding 19.05% (24/126) 1.52 3e-06 0.000977
GO:0140658 ATP-dependent chromatin remodeler activity 3.17% (4/126) 5.06 6e-06 0.001147
GO:0008094 ATP-dependent activity, acting on DNA 3.17% (4/126) 4.32 5.1e-05 0.004551
GO:0005488 binding 38.1% (48/126) 0.77 5e-05 0.00597
GO:0000956 nuclear-transcribed mRNA catabolic process 1.59% (2/126) 6.69 0.000155 0.006963
GO:0006402 mRNA catabolic process 1.59% (2/126) 6.69 0.000155 0.006963
GO:0006401 RNA catabolic process 1.59% (2/126) 6.46 0.000216 0.008646
GO:0046907 intracellular transport 4.76% (6/126) 2.93 0.000147 0.008824
GO:0051649 establishment of localization in cell 4.76% (6/126) 2.93 0.000147 0.008824
GO:0003674 molecular_function 52.38% (66/126) 0.51 0.000262 0.009425
GO:0006886 intracellular protein transport 3.97% (5/126) 3.03 0.000389 0.011682
GO:0140097 catalytic activity, acting on DNA 3.17% (4/126) 3.58 0.000362 0.01184
GO:0051641 cellular localization 4.76% (6/126) 2.62 0.00047 0.013014
GO:0016192 vesicle-mediated transport 3.97% (5/126) 2.91 0.000563 0.014488
GO:0044270 cellular nitrogen compound catabolic process 1.59% (2/126) 4.88 0.002098 0.022891
GO:0046700 heterocycle catabolic process 1.59% (2/126) 4.88 0.002098 0.022891
GO:1901361 organic cyclic compound catabolic process 1.59% (2/126) 4.88 0.002098 0.022891
GO:0019439 aromatic compound catabolic process 1.59% (2/126) 4.88 0.002098 0.022891
GO:0008104 protein localization 3.97% (5/126) 2.62 0.001415 0.023157
GO:0045184 establishment of protein localization 3.97% (5/126) 2.62 0.001415 0.023157
GO:0070727 cellular macromolecule localization 3.97% (5/126) 2.62 0.001415 0.023157
GO:0033036 macromolecule localization 3.97% (5/126) 2.62 0.001415 0.023157
GO:0010605 negative regulation of macromolecule metabolic process 1.59% (2/126) 4.95 0.001903 0.023618
GO:0031324 negative regulation of cellular metabolic process 1.59% (2/126) 4.95 0.001903 0.023618
GO:0009892 negative regulation of metabolic process 1.59% (2/126) 4.95 0.001903 0.023618
GO:0031327 negative regulation of cellular biosynthetic process 1.59% (2/126) 5.02 0.001716 0.023759
GO:0010558 negative regulation of macromolecule biosynthetic process 1.59% (2/126) 5.02 0.001716 0.023759
GO:0009890 negative regulation of biosynthetic process 1.59% (2/126) 5.02 0.001716 0.023759
GO:0140640 catalytic activity, acting on a nucleic acid 4.76% (6/126) 2.27 0.00162 0.025362
GO:0071705 nitrogen compound transport 3.97% (5/126) 2.34 0.003278 0.026223
GO:0048284 organelle fusion 0.79% (1/126) 8.27 0.003238 0.026495
GO:0061025 membrane fusion 0.79% (1/126) 8.27 0.003238 0.026495
GO:0048280 vesicle fusion with Golgi apparatus 0.79% (1/126) 8.27 0.003238 0.026495
GO:0004197 cysteine-type endopeptidase activity 0.79% (1/126) 8.27 0.003238 0.026495
GO:0007030 Golgi organization 0.79% (1/126) 8.27 0.003238 0.026495
GO:0004198 calcium-dependent cysteine-type endopeptidase activity 0.79% (1/126) 8.27 0.003238 0.026495
GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity 0.79% (1/126) 8.27 0.003238 0.026495
GO:0016050 vesicle organization 0.79% (1/126) 8.27 0.003238 0.026495
GO:0006906 vesicle fusion 0.79% (1/126) 8.27 0.003238 0.026495
GO:0090174 organelle membrane fusion 0.79% (1/126) 8.27 0.003238 0.026495
GO:0071702 organic substance transport 3.97% (5/126) 2.32 0.003417 0.026739
GO:0010629 negative regulation of gene expression 1.59% (2/126) 5.27 0.001212 0.027266
GO:0034655 nucleobase-containing compound catabolic process 1.59% (2/126) 5.18 0.00137 0.02741
GO:0140657 ATP-dependent activity 5.56% (7/126) 2.13 0.001162 0.027891
GO:0015031 protein transport 3.97% (5/126) 2.64 0.001319 0.02793
GO:0140513 nuclear protein-containing complex 2.38% (3/126) 3.38 0.003074 0.032545
GO:0003682 chromatin binding 1.59% (2/126) 4.36 0.004265 0.032665
GO:0008270 zinc ion binding 4.76% (6/126) 1.96 0.004709 0.03532
GO:0044248 cellular catabolic process 1.59% (2/126) 4.23 0.005144 0.03779
GO:0110156 methylguanosine-cap decapping 0.79% (1/126) 7.27 0.006466 0.041568
GO:0003724 RNA helicase activity 0.79% (1/126) 7.27 0.006466 0.041568
GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA 0.79% (1/126) 7.27 0.006466 0.041568
GO:0110154 RNA decapping 0.79% (1/126) 7.27 0.006466 0.041568
GO:0008186 ATP-dependent activity, acting on RNA 0.79% (1/126) 7.27 0.006466 0.041568
GO:0048519 negative regulation of biological process 1.59% (2/126) 4.06 0.006434 0.045413
GO:0048523 negative regulation of cellular process 1.59% (2/126) 4.06 0.006434 0.045413
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_33 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_119 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_134 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_157 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_200 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_240 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_401 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_1 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_4 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_10 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_14 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_16 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_18 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_30 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_34 0.019 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_36 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_37 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_53 0.015 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_55 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_57 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_63 0.024 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_67 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_73 0.017 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_84 0.018 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_90 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_92 0.017 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_93 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_94 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_98 0.019 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_109 0.016 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_121 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_123 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_124 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_132 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_138 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_139 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_149 0.022 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_150 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_156 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_168 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_172 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_175 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_177 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_189 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_191 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_193 0.017 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_201 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_204 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_209 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_211 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_212 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_218 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_235 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_240 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_250 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_300 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_42 0.018 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_110 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (126) (download table)

InterPro Domains

GO Terms

Family Terms