Spov3_chr3.01859

Description : subunit beta of ATP synthase peripheral MF1 subcomplex

Gene families : OG0000749 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000749_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr3.01859
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_1

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034220	monoatomic ion transmembrane transport	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046034	ATP metabolic process	IEA	Interproscan
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:0098655	monoatomic cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1902600	proton transmembrane transport	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003855	3-dehydroquinate dehydratase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003883	CTP synthase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003924	GTPase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004576	oligosaccharyl transferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004764	shikimate 3-dehydrogenase (NADP+) activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005198	structural molecule activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005525	GTP binding	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005575	cellular_component	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005737	cytoplasm	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006099	tricarboxylic acid cycle	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006220	pyrimidine nucleotide metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006486	protein glycosylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006487	protein N-linked glycosylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006886	intracellular protein transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0008104	protein localization	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0008250	oligosaccharyltransferase complex	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015031	protein transport	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0016020	membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016192	vesicle-mediated transport	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016462	pyrophosphatase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016491	oxidoreductase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016829	lyase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016874	ligase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0017003	protein-heme linkage	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0017004	cytochrome complex assembly	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0017006	protein-tetrapyrrole linkage	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019001	guanyl nucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0019867	outer membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0030117	membrane coat	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0030118	clathrin coat	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0030120	vesicle coat	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0030125	clathrin vesicle coat	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0030126	COPI vesicle coat	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0030127	COPII vesicle coat	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0030132	clathrin coat of coated pit	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0032977	membrane insertase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0033036	macromolecule localization	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0033218	amide binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0042802	identical protein binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0042803	protein homodimerization activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043413	macromolecule glycosylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0045184	establishment of protein localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046907	intracellular transport	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0051087	protein-folding chaperone binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051641	cellular localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051649	establishment of localization in cell	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0060590	ATPase regulator activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0070085	glycosylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0070727	cellular macromolecule localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071702	organic substance transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071705	nitrogen compound transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0098796	membrane protein complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0098797	plasma membrane protein complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0110165	cellular anatomical entity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0120227	acyl-CoA binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140104	molecular carrier activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140597	protein carrier chaperone	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:1901567	fatty acid derivative binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:1901681	sulfur compound binding	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000194	ATPase_F1/V1/A1_a/bsu_nucl-bd	209	430
IPR004100	ATPase_F1/V1/A1_a/bsu_N	86	152

External Links

No external refs found!

Spov3_chr3.01859

Expression Profile

Co-expression Networks

Functional Annotation