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  5. Lsat_1_v5_gn_9_90020.1

Lsat_1_v5_gn_9_90020.1 (ATVPS11, VPS11)


Aliases : ATVPS11, VPS11

Description : component *(VPS11) of HOPS/CORVET membrane tethering complexes


Gene families : OG0009025 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_90020.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_22


Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004427 inorganic diphosphate phosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004576 oligosaccharyl transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004594 pantothenate kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005789 endoplasmic reticulum membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006486 protein glycosylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006487 protein N-linked glycosylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006887 exocytosis IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0008303 caspase complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0009678 diphosphate hydrolysis-driven proton transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009966 regulation of signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010646 regulation of cell communication IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015936 coenzyme A metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015937 coenzyme A biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016255 attachment of GPI anchor to protein IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016409 palmitoyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016758 hexosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0023051 regulation of signaling IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030126 COPI vesicle coat IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032012 regulation of ARF protein signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032940 secretion by cell IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0042765 GPI-anchor transamidase complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043248 proteasome assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043413 macromolecule glycosylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046578 regulation of Ras protein signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046903 secretion IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048583 regulation of response to stimulus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070085 glycosylation IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0140352 export from cell IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1902531 regulation of intracellular signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1905369 endopeptidase complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000547 Clathrin_H-chain/VPS_repeat 400 537
IPR024763 VPS11_C 889 930
IPR001841 Znf_RING 848 883
No external refs found!