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  5. Lsat_1_v5_gn_8_116260.1

Lsat_1_v5_gn_8_116260.1 (AtACT7, ACT7)


Aliases : AtACT7, ACT7

Description : actin filament protein


Gene families : OG0000083 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_116260.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Bra016895 No alias not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_8_15800.1 ACT11 actin filament protein 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Mp6g11010.1 LSR2, ACT2,... actin filament protein 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003743 translation initiation factor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003924 GTPase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004743 pyruvate kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005488 binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005741 mitochondrial outer membrane IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005787 signal peptidase complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006413 translational initiation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006465 signal peptide processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006486 protein glycosylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006487 protein N-linked glycosylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006605 protein targeting IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006612 protein targeting to membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006613 cotranslational protein targeting to membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006810 transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0008250 oligosaccharyltransferase complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008312 7S RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016485 protein processing IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030118 clathrin coat IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030125 clathrin vesicle coat IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030126 COPI vesicle coat IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030132 clathrin coat of coated pit IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030955 potassium ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031420 alkali metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031968 organelle outer membrane IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033365 protein localization to organelle IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0034998 oligosaccharyltransferase I complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043413 macromolecule glycosylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045047 protein targeting to ER IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0048500 signal recognition particle IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051179 localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051668 localization within membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070085 glycosylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070972 protein localization to endoplasmic reticulum IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072594 establishment of protein localization to organelle IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072657 protein localization to membrane IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0090150 establishment of protein localization to membrane IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!