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Aliases : COG0212
Description : 5,10-methenyl-THF synthetase
Gene families : OG0025318 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra003710 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_216 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000105 | histidine biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004356 | glutamine synthetase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004359 | glutaminase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004424 | imidazoleglycerol-phosphate dehydratase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004664 | prephenate dehydratase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005743 | mitochondrial inner membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005744 | TIM23 mitochondrial import inner membrane translocase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006082 | organic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006520 | amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006541 | glutamine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006542 | glutamine biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006547 | histidine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006558 | L-phenylalanine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006766 | vitamin metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006839 | mitochondrial transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006848 | pyruvate transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006850 | mitochondrial pyruvate transmembrane transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009058 | biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009094 | L-phenylalanine biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0009521 | photosystem | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0009523 | photosystem II | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015718 | monocarboxylic acid transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015979 | photosynthesis | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016211 | ammonia ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016829 | lyase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016836 | hydro-lyase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016851 | magnesium chelatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016853 | isomerase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016874 | ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0019866 | organelle inner membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0030150 | protein import into mitochondrial matrix | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0031090 | organelle membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0031966 | mitochondrial membrane | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0033743 | peptide-methionine (R)-S-oxide reductase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042816 | vitamin B6 metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042819 | vitamin B6 biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042822 | pyridoxal phosphate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042823 | pyridoxal phosphate biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044281 | small molecule metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044743 | protein transmembrane import into intracellular organelle | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046184 | aldehyde biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0046422 | violaxanthin de-epoxidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0051002 | ligase activity, forming nitrogen-metal bonds | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0051003 | ligase activity, forming nitrogen-metal bonds, forming coordination complexes | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0051540 | metal cluster binding | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0061617 | MICOS complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0065002 | intracellular protein transmembrane transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0070585 | protein localization to mitochondrion | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071806 | protein transmembrane transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0072655 | establishment of protein localization to mitochondrion | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0098796 | membrane protein complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0098798 | mitochondrial protein-containing complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901475 | pyruvate transmembrane transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1902221 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1902223 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1902494 | catalytic complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1903825 | organic acid transmembrane transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1990204 | oxidoreductase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1990542 | mitochondrial transmembrane transport | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002698 | FTHF_cligase | 90 | 288 |
| No external refs found! |