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Aliases : ATIMD2, IMD2
Description : methylthioalkylmalate dehydrogenase. 3-isopropylmalate dehydrogenase. EC_1.1 oxidoreductase acting on CH-OH group of donor
Gene families : OG0002922 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002922_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra008463 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_235 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003674 | molecular_function | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004814 | arginine-tRNA ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005524 | ATP binding | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005737 | cytoplasm | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006082 | organic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006399 | tRNA metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006420 | arginyl-tRNA aminoacylation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006457 | protein folding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006520 | amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006553 | lysine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006952 | defense response | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008150 | biological_process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008839 | 4-hydroxy-tetrahydrodipicolinate reductase | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009085 | lysine biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016874 | ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0017076 | purine nucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0032553 | ribonucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0036094 | small molecule binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0042586 | peptide deformylase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043038 | amino acid activation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0043167 | ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0043168 | anion binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0044183 | protein folding chaperone | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044281 | small molecule metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046451 | diaminopimelate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140657 | ATP-dependent activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR024084 | IsoPropMal-DH-like_dom | 45 | 394 |
| No external refs found! |