Bra007092 (SD3)

Aliases : SD3

Description : component *(Tim21) of inner mitochondrion membrane TIM translocation system

Gene families : OG0015200 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra007092
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_216

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005744	TIM23 mitochondrial import inner membrane translocase complex	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006839	mitochondrial transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0030150	protein import into mitochondrial matrix	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0044743	protein transmembrane import into intracellular organelle	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0065002	intracellular protein transmembrane transport	None	Extended
BP	GO:0070585	protein localization to mitochondrion	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071806	protein transmembrane transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072655	establishment of protein localization to mitochondrion	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098798	mitochondrial protein-containing complex	None	Extended
CC	GO:0098800	inner mitochondrial membrane protein complex	None	Extended
BP	GO:1990542	mitochondrial transmembrane transport	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000105	histidine biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004177	aminopeptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004359	glutaminase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004424	imidazoleglycerol-phosphate dehydratase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005509	calcium ion binding	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005743	mitochondrial inner membrane	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006082	organic acid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006497	protein lipidation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006505	GPI anchor metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006506	GPI anchor biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006520	amino acid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006547	histidine metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006643	membrane lipid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006664	glycolipid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006766	vitamin metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006807	nitrogen compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008152	metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008652	amino acid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008654	phospholipid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009058	biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009110	vitamin biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009247	glycolipid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0009523	photosystem II	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016053	organic acid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016836	hydro-lyase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019637	organophosphate metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019752	carboxylic acid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0019866	organelle inner membrane	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0019898	extrinsic component of membrane	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0031966	mitochondrial membrane	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042816	vitamin B6 metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042819	vitamin B6 biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042822	pyridoxal phosphate metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0042823	pyridoxal phosphate biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043436	oxoacid metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044237	cellular metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044249	cellular biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044281	small molecule metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044283	small molecule biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046184	aldehyde biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0061617	MICOS complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0071704	organic substance metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0090407	organophosphate biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901576	organic substance biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1903509	liposaccharide metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:1990204	oxidoreductase complex	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR013261	Tim21	109	234

External Links

No external refs found!

Bra007092 (SD3)

Expression Profile

Co-expression Networks

Functional Annotation