Lsat_1_v5_gn_5_104601.1 (cpHsc70-1)

Aliases : cpHsc70-1

Description : chaperone *(cpHsc70))

Gene families : OG0000466 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000466_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_104601.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_9

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0044183	protein folding chaperone	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:0140662	ATP-dependent protein folding chaperone	IEA	Interproscan
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003676	nucleic acid binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003916	DNA topoisomerase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003937	IMP cyclohydrolase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004018	N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004175	endopeptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004222	metalloendopeptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004643	phosphoribosylaminoimidazolecarboxamide formyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004820	glycine-tRNA ligase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005525	GTP binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005694	chromosome	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006163	purine nucleotide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006188	IMP biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006259	DNA metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006265	DNA topological change	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006396	RNA processing	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006399	tRNA metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006400	tRNA modification	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006426	glycyl-tRNA aminoacylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006520	amino acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006807	nitrogen compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006996	organelle organization	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008173	RNA methyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008175	tRNA methyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008176	tRNA (guanine-N7-)-methyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008237	metallopeptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009117	nucleotide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009123	nucleoside monophosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009124	nucleoside monophosphate biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009126	purine nucleoside monophosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009127	purine nucleoside monophosphate biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009161	ribonucleoside monophosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009165	nucleotide biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009167	purine ribonucleoside monophosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009168	purine ribonucleoside monophosphate biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009451	RNA modification	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0009982	pseudouridine synthase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016423	tRNA (guanine) methyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016462	pyrophosphatase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016842	amidine-lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016853	isomerase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016866	intramolecular transferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016874	ligase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016887	ATP hydrolysis activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0018130	heterocycle biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019001	guanyl nucleotide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019238	cyclohydrolase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0019898	extrinsic component of membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0031072	heat shock protein binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034660	ncRNA metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043038	amino acid activation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043039	tRNA aminoacylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043170	macromolecule metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044238	primary metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044281	small molecule metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046040	IMP metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046483	heterocycle metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051276	chromosome organization	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0051536	iron-sulfur cluster binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0051540	metal cluster binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0071103	DNA conformation change	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0071949	FAD binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072521	purine-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0090304	nucleic acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0090407	organophosphate biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR013126	Hsp_70_fam	66	660

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Lsat_1_v5_gn_5_104601.1 (cpHsc70-1)

Expression Profile

Co-expression Networks

Functional Annotation