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  5. Bra003449

Bra003449 (SK21, ASK21)


Aliases : SK21, ASK21

Description : ASK-type linker component of SCF E3 ubiquitin ligase complexes


Gene families : OG0013847 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra003449
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_178


Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003743 translation initiation factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004664 prephenate dehydratase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004866 endopeptidase inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006405 RNA export from nucleus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006406 mRNA export from nucleus IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006413 translational initiation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006558 L-phenylalanine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006913 nucleocytoplasmic transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008033 tRNA processing IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008170 N-methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008173 RNA methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008175 tRNA methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008652 amino acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009072 aromatic amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009094 L-phenylalanine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Brassica rapa GO terms from Neighborhoods
BP GO:0015931 nucleobase-containing compound transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016836 hydro-lyase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022607 cellular component assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030414 peptidase inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031369 translation initiation factor binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043248 proteasome assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050657 nucleic acid transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050658 RNA transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051028 mRNA transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051168 nuclear export IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051169 nuclear transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051236 establishment of RNA localization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0061134 peptidase regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0061135 endopeptidase regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901605 alpha-amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901607 alpha-amino acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR016072 Skp1_comp_dimer 120 157
No external refs found!