Spov3_chr4.03763 (ftsh4, AtFtsH4)

Aliases : ftsh4, AtFtsH4

Description : ATP-dependent metalloprotease *(FtsH4/11)

Gene families : OG0005000 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005000_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr4.03763
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_42

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004176	ATP-dependent peptidase activity	IEA	Interproscan
MF	GO:0004222	metalloendopeptidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003682	chromatin binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003712	transcription coregulator activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004402	histone acetyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005515	protein binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005516	calmodulin binding	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005643	nuclear pore	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006473	protein acetylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006475	internal protein amino acid acetylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006886	intracellular protein transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006906	vesicle fusion	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006913	nucleocytoplasmic transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0007030	Golgi organization	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008080	N-acetyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0008104	protein localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009966	regulation of signal transduction	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010646	regulation of cell communication	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015031	protein transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016050	vesicle organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016192	vesicle-mediated transport	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016407	acetyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016410	N-acyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016570	histone modification	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016573	histone acetylation	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0016592	mediator complex	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0017056	structural constituent of nuclear pore	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0018205	peptidyl-lysine modification	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0018393	internal peptidyl-lysine acetylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0018394	peptidyl-lysine acetylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0023051	regulation of signaling	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0030117	membrane coat	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0030120	vesicle coat	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0030126	COPI vesicle coat	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0033036	macromolecule localization	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043543	protein acylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0045184	establishment of protein localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046907	intracellular transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0048280	vesicle fusion with Golgi apparatus	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0048284	organelle fusion	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0048583	regulation of response to stimulus	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051169	nuclear transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051641	cellular localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051649	establishment of localization in cell	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0061024	membrane organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0061025	membrane fusion	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0070727	cellular macromolecule localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071702	organic substance transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071705	nitrogen compound transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0090174	organelle membrane fusion	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0098588	bounding membrane of organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0140513	nuclear protein-containing complex	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140993	histone modifying activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1902531	regulation of intracellular signal transduction	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR041569	AAA_lid_3	415	458
IPR000642	Peptidase_M41	474	654
IPR003959	ATPase_AAA_core	263	392

External Links

No external refs found!

Spov3_chr4.03763 (ftsh4, AtFtsH4)

Expression Profile

Co-expression Networks

Functional Annotation