Coexpression cluster: Cluster_12 (Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0065007 biological regulation 8.42% (8/95) 2.56 6.4e-05 0.001941
GO:0003924 GTPase activity 5.26% (5/95) 3.57 6.4e-05 0.002256
GO:0003676 nucleic acid binding 13.68% (13/95) 1.86 5.6e-05 0.002376
GO:0050789 regulation of biological process 8.42% (8/95) 2.59 5.5e-05 0.002914
GO:0050794 regulation of cellular process 8.42% (8/95) 2.63 4.7e-05 0.003318
GO:0030695 GTPase regulator activity 3.16% (3/95) 5.45 4e-05 0.004187
GO:0060589 nucleoside-triphosphatase regulator activity 3.16% (3/95) 5.45 4e-05 0.004187
GO:0003682 chromatin binding 3.16% (3/95) 4.62 0.000241 0.006362
GO:0080090 regulation of primary metabolic process 6.32% (6/95) 2.71 0.000314 0.006632
GO:0051171 regulation of nitrogen compound metabolic process 6.32% (6/95) 2.71 0.000314 0.006632
GO:0019222 regulation of metabolic process 6.32% (6/95) 2.62 0.000438 0.007105
GO:0031323 regulation of cellular metabolic process 6.32% (6/95) 2.63 0.000426 0.007494
GO:0060255 regulation of macromolecule metabolic process 6.32% (6/95) 2.63 0.000426 0.007494
GO:0044877 protein-containing complex binding 3.16% (3/95) 4.26 0.000507 0.007647
GO:0045182 translation regulator activity 3.16% (3/95) 4.13 0.000662 0.007766
GO:0090079 translation regulator activity, nucleic acid binding 3.16% (3/95) 4.13 0.000662 0.007766
GO:0008135 translation factor activity, RNA binding 3.16% (3/95) 4.13 0.000662 0.007766
GO:0003674 molecular_function 48.42% (46/95) 0.6 0.000592 0.008332
GO:0005096 GTPase activator activity 2.11% (2/95) 5.35 0.001039 0.011534
GO:0030234 enzyme regulator activity 3.16% (3/95) 3.87 0.001134 0.01196
GO:0098772 molecular function regulator activity 3.16% (3/95) 3.71 0.001573 0.012294
GO:2001141 regulation of RNA biosynthetic process 5.26% (5/95) 2.57 0.001567 0.012715
GO:0051252 regulation of RNA metabolic process 5.26% (5/95) 2.57 0.001567 0.012715
GO:0006355 regulation of DNA-templated transcription 5.26% (5/95) 2.57 0.001567 0.012715
GO:0003677 DNA binding 6.32% (6/95) 2.18 0.002113 0.012739
GO:0019219 regulation of nucleobase-containing compound metabolic process 5.26% (5/95) 2.55 0.001691 0.01274
GO:0009889 regulation of biosynthetic process 5.26% (5/95) 2.47 0.002105 0.013063
GO:0031326 regulation of cellular biosynthetic process 5.26% (5/95) 2.47 0.002105 0.013063
GO:0010556 regulation of macromolecule biosynthetic process 5.26% (5/95) 2.47 0.002105 0.013063
GO:0010468 regulation of gene expression 5.26% (5/95) 2.47 0.002105 0.013063
GO:0017111 ribonucleoside triphosphate phosphatase activity 5.26% (5/95) 2.51 0.001913 0.013451
GO:0016755 aminoacyltransferase activity 3.16% (3/95) 3.62 0.001882 0.01369
GO:0008047 enzyme activator activity 2.11% (2/95) 5.09 0.001514 0.013886
GO:0140677 molecular function activator activity 2.11% (2/95) 4.77 0.002385 0.013979
GO:0016462 pyrophosphatase activity 5.26% (5/95) 2.42 0.002475 0.014115
GO:0019787 ubiquitin-like protein transferase activity 3.16% (3/95) 3.74 0.001478 0.014175
GO:0004842 ubiquitin-protein transferase activity 3.16% (3/95) 3.74 0.001478 0.014175
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 5.26% (5/95) 2.38 0.002767 0.01497
GO:0008138 protein tyrosine/serine/threonine phosphatase activity 2.11% (2/95) 4.68 0.002717 0.015087
GO:0016817 hydrolase activity, acting on acid anhydrides 5.26% (5/95) 2.37 0.00289 0.015247
GO:0016311 dephosphorylation 2.11% (2/95) 4.51 0.003442 0.016892
GO:0009719 response to endogenous stimulus 2.11% (2/95) 4.51 0.003442 0.016892
GO:0009725 response to hormone 2.11% (2/95) 4.51 0.003442 0.016892
GO:0004721 phosphoprotein phosphatase activity 2.11% (2/95) 4.43 0.003835 0.017983
GO:0010033 response to organic substance 2.11% (2/95) 4.43 0.003835 0.017983
GO:0003743 translation initiation factor activity 2.11% (2/95) 4.28 0.00468 0.021467
GO:1901363 heterocyclic compound binding 18.95% (18/95) 0.88 0.007548 0.033181
GO:0097159 organic cyclic compound binding 18.95% (18/95) 0.88 0.007548 0.033181
GO:0045859 regulation of protein kinase activity 1.05% (1/95) 6.68 0.00976 0.034903
GO:0071900 regulation of protein serine/threonine kinase activity 1.05% (1/95) 6.68 0.00976 0.034903
GO:0043549 regulation of kinase activity 1.05% (1/95) 6.68 0.00976 0.034903
GO:0051338 regulation of transferase activity 1.05% (1/95) 6.68 0.00976 0.034903
GO:0007264 small GTPase mediated signal transduction 1.05% (1/95) 6.68 0.00976 0.034903
GO:1904029 regulation of cyclin-dependent protein kinase activity 1.05% (1/95) 6.68 0.00976 0.034903
GO:0042325 regulation of phosphorylation 1.05% (1/95) 6.68 0.00976 0.034903
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity 1.05% (1/95) 6.68 0.00976 0.034903
GO:0001932 regulation of protein phosphorylation 1.05% (1/95) 6.68 0.00976 0.034903
GO:0019900 kinase binding 1.05% (1/95) 6.68 0.00976 0.034903
GO:0019901 protein kinase binding 1.05% (1/95) 6.68 0.00976 0.034903
GO:0005634 nucleus 3.16% (3/95) 2.71 0.011027 0.038777
GO:0042221 response to chemical 2.11% (2/95) 3.59 0.011998 0.041501
GO:0016746 acyltransferase activity 4.21% (4/95) 2.14 0.012956 0.044094
GO:0035556 intracellular signal transduction 2.11% (2/95) 3.47 0.014109 0.047254
GO:0061630 ubiquitin protein ligase activity 1.05% (1/95) 6.09 0.014604 0.047407
GO:0061659 ubiquitin-like protein ligase activity 1.05% (1/95) 6.09 0.014604 0.047407
GO:0016791 phosphatase activity 2.11% (2/95) 3.39 0.015599 0.04987
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_180 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_197 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_257 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_41 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_137 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_63 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_152 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_16 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_119 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_130 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_160 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (95) (download table)

InterPro Domains

GO Terms

Family Terms