ID | Label | % in cluster | Enrichment log2 | p-value | Corrected p-value |
---|---|---|---|---|---|
GO:0009521 | photosystem | 27.08% (13/48) | 7.88 | 0.0 | 0.0 |
GO:0015979 | photosynthesis | 25.0% (12/48) | 7.63 | 0.0 | 0.0 |
GO:0098796 | membrane protein complex | 29.17% (14/48) | 6.3 | 0.0 | 0.0 |
GO:0009522 | photosystem I | 14.58% (7/48) | 8.99 | 0.0 | 0.0 |
GO:0032991 | protein-containing complex | 29.17% (14/48) | 4.81 | 0.0 | 0.0 |
GO:0009523 | photosystem II | 12.5% (6/48) | 7.57 | 0.0 | 0.0 |
GO:0009538 | photosystem I reaction center | 8.33% (4/48) | 9.5 | 0.0 | 0.0 |
GO:0009654 | photosystem II oxygen evolving complex | 10.42% (5/48) | 7.74 | 0.0 | 0.0 |
GO:1990204 | oxidoreductase complex | 10.42% (5/48) | 7.5 | 0.0 | 0.0 |
GO:0019898 | extrinsic component of membrane | 8.33% (4/48) | 7.7 | 0.0 | 0.0 |
GO:0005575 | cellular_component | 29.17% (14/48) | 2.39 | 0.0 | 3e-06 |
GO:0008152 | metabolic process | 37.5% (18/48) | 1.91 | 0.0 | 5e-06 |
GO:1902494 | catalytic complex | 10.42% (5/48) | 4.94 | 1e-06 | 8e-06 |
GO:0044237 | cellular metabolic process | 29.17% (14/48) | 2.18 | 1e-06 | 1.4e-05 |
GO:0009987 | cellular process | 33.33% (16/48) | 1.78 | 7e-06 | 7.1e-05 |
GO:0010207 | photosystem II assembly | 4.17% (2/48) | 8.5 | 1.1e-05 | 0.000112 |
GO:0008150 | biological_process | 41.67% (20/48) | 1.43 | 1.2e-05 | 0.000116 |
GO:0005509 | calcium ion binding | 8.33% (4/48) | 4.5 | 3e-05 | 0.000268 |
GO:0010242 | oxygen evolving activity | 2.08% (1/48) | 9.5 | 0.001376 | 0.008919 |
GO:0042549 | photosystem II stabilization | 2.08% (1/48) | 9.5 | 0.001376 | 0.008919 |
GO:0043743 | LPPG:FO 2-phospho-L-lactate transferase activity | 2.08% (1/48) | 9.5 | 0.001376 | 0.008919 |
GO:0043467 | regulation of generation of precursor metabolites and energy | 2.08% (1/48) | 9.5 | 0.001376 | 0.008919 |
GO:0008685 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity | 2.08% (1/48) | 9.5 | 0.001376 | 0.008919 |
GO:0042548 | regulation of photosynthesis, light reaction | 2.08% (1/48) | 9.5 | 0.001376 | 0.008919 |
GO:0010109 | regulation of photosynthesis | 2.08% (1/48) | 9.5 | 0.001376 | 0.008919 |
GO:0009507 | chloroplast | 2.08% (1/48) | 8.5 | 0.002751 | 0.013504 |
GO:0016851 | magnesium chelatase activity | 2.08% (1/48) | 8.5 | 0.002751 | 0.013504 |
GO:0051002 | ligase activity, forming nitrogen-metal bonds | 2.08% (1/48) | 8.5 | 0.002751 | 0.013504 |
GO:0051003 | ligase activity, forming nitrogen-metal bonds, forming coordination complexes | 2.08% (1/48) | 8.5 | 0.002751 | 0.013504 |
GO:0009536 | plastid | 2.08% (1/48) | 8.5 | 0.002751 | 0.013504 |
GO:0030091 | protein repair | 2.08% (1/48) | 8.5 | 0.002751 | 0.013504 |
GO:0010206 | photosystem II repair | 2.08% (1/48) | 8.5 | 0.002751 | 0.013504 |
GO:0065003 | protein-containing complex assembly | 4.17% (2/48) | 4.83 | 0.002265 | 0.014115 |
GO:0022607 | cellular component assembly | 4.17% (2/48) | 4.5 | 0.003542 | 0.016392 |
GO:0043933 | protein-containing complex organization | 4.17% (2/48) | 4.5 | 0.003542 | 0.016392 |
GO:0110165 | cellular anatomical entity | 14.58% (7/48) | 1.63 | 0.006801 | 0.030605 |
GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | 2.08% (1/48) | 6.7 | 0.009596 | 0.037011 |
GO:0016114 | terpenoid biosynthetic process | 2.08% (1/48) | 6.7 | 0.009596 | 0.037011 |
GO:0015252 | proton channel activity | 2.08% (1/48) | 6.7 | 0.009596 | 0.037011 |
GO:0005261 | monoatomic cation channel activity | 2.08% (1/48) | 6.7 | 0.009596 | 0.037011 |
GO:0006721 | terpenoid metabolic process | 2.08% (1/48) | 6.7 | 0.009596 | 0.037011 |
GO:0016874 | ligase activity | 4.17% (2/48) | 3.8 | 0.009086 | 0.039781 |
GO:0016849 | phosphorus-oxygen lyase activity | 2.08% (1/48) | 6.34 | 0.01232 | 0.046417 |
Clade | % in cluster | Enrichment log2 | p-value | Corrected p-value | Gene Family Method |
---|---|---|---|---|---|
No enriched Clades found |
Species | Clustering Method | Target | Jaccard index | Gene Family Method (for comparison) | Actions |
---|---|---|---|---|---|
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_55 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_123 | 0.039 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_142 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_179 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_181 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_192 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Brassica rapa | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) | Cluster_237 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_13 | 0.017 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_105 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_146 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Lactuca sativa | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) | Cluster_148 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_103 | 0.007 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_167 | 0.008 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Spinacia oleracea | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) | Cluster_173 | 0.009 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |
Marchantia polymorpha | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) | Cluster_104 | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | Compare |