Coexpression cluster: Cluster_181 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0046907 intracellular transport 7.61% (7/92) 3.84 1e-06 8.3e-05
GO:0051649 establishment of localization in cell 7.61% (7/92) 3.84 1e-06 8.3e-05
GO:0006886 intracellular protein transport 6.52% (6/92) 4.11 1e-06 0.000122
GO:0016192 vesicle-mediated transport 6.52% (6/92) 3.88 4e-06 0.000187
GO:0051641 cellular localization 7.61% (7/92) 3.48 3e-06 0.000216
GO:0033036 macromolecule localization 6.52% (6/92) 3.61 1.1e-05 0.000253
GO:0008104 protein localization 6.52% (6/92) 3.61 1.1e-05 0.000253
GO:0045184 establishment of protein localization 6.52% (6/92) 3.61 1.1e-05 0.000253
GO:0070727 cellular macromolecule localization 6.52% (6/92) 3.61 1.1e-05 0.000253
GO:0015031 protein transport 6.52% (6/92) 3.64 9e-06 0.000348
GO:0030117 membrane coat 4.35% (4/92) 4.99 8e-06 0.000349
GO:0071705 nitrogen compound transport 6.52% (6/92) 3.28 3.8e-05 0.000816
GO:0071702 organic substance transport 6.52% (6/92) 3.22 4.9e-05 0.000904
GO:0032991 protein-containing complex 9.78% (9/92) 2.42 4.9e-05 0.00097
GO:0065004 protein-DNA complex assembly 3.26% (3/92) 5.25 6.8e-05 0.001185
GO:0071824 protein-DNA complex organization 3.26% (3/92) 4.77 0.000188 0.003058
GO:0030132 clathrin coat of coated pit 2.17% (2/92) 6.34 0.000272 0.003531
GO:0030130 clathrin coat of trans-Golgi network vesicle 2.17% (2/92) 6.34 0.000272 0.003531
GO:0030125 clathrin vesicle coat 2.17% (2/92) 6.34 0.000272 0.003531
GO:0030118 clathrin coat 2.17% (2/92) 6.34 0.000272 0.003531
GO:0003924 GTPase activity 5.43% (5/92) 3.06 0.000353 0.004374
GO:0017111 ribonucleoside triphosphate phosphatase activity 6.52% (6/92) 2.54 0.000611 0.007218
GO:0016462 pyrophosphatase activity 6.52% (6/92) 2.47 0.000779 0.008804
GO:0016817 hydrolase activity, acting on acid anhydrides 6.52% (6/92) 2.43 0.000903 0.009392
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 6.52% (6/92) 2.44 0.000875 0.009482
GO:0032561 guanyl ribonucleotide binding 5.43% (5/92) 2.65 0.00127 0.01179
GO:0005525 GTP binding 5.43% (5/92) 2.65 0.00127 0.01179
GO:0019001 guanyl nucleotide binding 5.43% (5/92) 2.61 0.0014 0.012137
GO:0032993 protein-DNA complex 2.17% (2/92) 5.15 0.001451 0.012173
GO:0000786 nucleosome 2.17% (2/92) 5.27 0.001228 0.012276
GO:0065003 protein-containing complex assembly 3.26% (3/92) 3.78 0.001393 0.01249
GO:0098797 plasma membrane protein complex 2.17% (2/92) 4.99 0.001821 0.014345
GO:0005575 cellular_component 19.57% (18/92) 1.08 0.001777 0.014441
GO:0034508 centromere complex assembly 1.09% (1/92) 8.8 0.002249 0.016708
GO:0005801 cis-Golgi network 1.09% (1/92) 8.8 0.002249 0.016708
GO:0022607 cellular component assembly 3.26% (3/92) 3.45 0.002679 0.017861
GO:0043933 protein-containing complex organization 3.26% (3/92) 3.49 0.002497 0.018033
GO:0034728 nucleosome organization 2.17% (2/92) 4.71 0.002679 0.018327
GO:0006334 nucleosome assembly 2.17% (2/92) 4.71 0.002679 0.018327
GO:0030120 vesicle coat 2.17% (2/92) 4.59 0.003166 0.020579
GO:0098796 membrane protein complex 4.35% (4/92) 2.67 0.003699 0.023455
GO:0045116 protein neddylation 1.09% (1/92) 7.8 0.004493 0.024338
GO:0000776 kinetochore 1.09% (1/92) 7.8 0.004493 0.024338
GO:0016877 ligase activity, forming carbon-sulfur bonds 1.09% (1/92) 7.8 0.004493 0.024338
GO:0099080 supramolecular complex 1.09% (1/92) 7.8 0.004493 0.024338
GO:0019781 NEDD8 activating enzyme activity 1.09% (1/92) 7.8 0.004493 0.024338
GO:0008641 ubiquitin-like modifier activating enzyme activity 1.09% (1/92) 7.8 0.004493 0.024338
GO:0006338 chromatin remodeling 2.17% (2/92) 4.34 0.004451 0.027556
GO:0006325 chromatin organization 2.17% (2/92) 4.21 0.005277 0.028
GO:0006810 transport 9.78% (9/92) 1.46 0.005593 0.029083
GO:0051234 establishment of localization 9.78% (9/92) 1.45 0.005716 0.02914
GO:0051179 localization 9.78% (9/92) 1.43 0.00639 0.03195
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_9 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_15 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_16 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_17 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_29 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_40 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_68 0.016 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_69 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_80 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_88 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_98 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_107 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_113 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_117 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_137 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_155 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_157 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_179 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_191 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_201 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_203 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_206 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_220 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_223 0.015 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_228 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_229 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_239 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_252 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_255 0.025 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_264 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_266 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_278 0.019 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_299 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_384 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_116 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_126 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_130 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_145 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_185 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_223 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_224 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_240 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_273 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_108 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_122 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_128 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_147 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_65 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_102 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (92) (download table)

InterPro Domains

GO Terms

Family Terms