Coexpression cluster: Cluster_156 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0004672 protein kinase activity 17.35% (17/98) 2.11 0.0 1.6e-05
GO:0016310 phosphorylation 17.35% (17/98) 2.12 0.0 2e-05
GO:0016773 phosphotransferase activity, alcohol group as acceptor 18.37% (18/98) 2.12 0.0 2.4e-05
GO:0016301 kinase activity 17.35% (17/98) 2.02 1e-06 2.5e-05
GO:0036211 protein modification process 18.37% (18/98) 1.92 1e-06 2.6e-05
GO:0016772 transferase activity, transferring phosphorus-containing groups 18.37% (18/98) 1.95 1e-06 2.7e-05
GO:0006468 protein phosphorylation 17.35% (17/98) 2.12 0.0 2.8e-05
GO:0043412 macromolecule modification 18.37% (18/98) 1.88 2e-06 3.1e-05
GO:0016740 transferase activity 24.49% (24/98) 1.54 1e-06 3.1e-05
GO:0006793 phosphorus metabolic process 17.35% (17/98) 1.93 2e-06 3.1e-05
GO:0006796 phosphate-containing compound metabolic process 17.35% (17/98) 1.93 2e-06 3.1e-05
GO:0140096 catalytic activity, acting on a protein 18.37% (18/98) 1.62 1.9e-05 0.000254
GO:0043565 sequence-specific DNA binding 7.14% (7/98) 3.12 1.7e-05 0.000255
GO:0019538 protein metabolic process 18.37% (18/98) 1.36 0.000196 0.002473
GO:0003700 DNA-binding transcription factor activity 8.16% (8/98) 2.21 0.000357 0.004209
GO:0140110 transcription regulator activity 8.16% (8/98) 2.17 0.000431 0.004487
GO:1901564 organonitrogen compound metabolic process 19.39% (19/98) 1.22 0.000417 0.004614
GO:0044237 cellular metabolic process 19.39% (19/98) 1.09 0.001225 0.010845
GO:0043170 macromolecule metabolic process 19.39% (19/98) 1.1 0.001146 0.011272
GO:0006807 nitrogen compound metabolic process 20.41% (20/98) 1.05 0.001221 0.011379
GO:0008194 UDP-glycosyltransferase activity 4.08% (4/98) 2.9 0.002115 0.017828
GO:0010556 regulation of macromolecule biosynthetic process 9.18% (9/98) 1.43 0.006344 0.034029
GO:0010468 regulation of gene expression 9.18% (9/98) 1.43 0.006344 0.034029
GO:0009889 regulation of biosynthetic process 9.18% (9/98) 1.43 0.006344 0.034029
GO:0031326 regulation of cellular biosynthetic process 9.18% (9/98) 1.43 0.006344 0.034029
GO:0019222 regulation of metabolic process 9.18% (9/98) 1.38 0.007707 0.034976
GO:0006783 heme biosynthetic process 1.02% (1/98) 7.12 0.00717 0.035254
GO:0051171 regulation of nitrogen compound metabolic process 9.18% (9/98) 1.41 0.007 0.0354
GO:0080090 regulation of primary metabolic process 9.18% (9/98) 1.41 0.007 0.0354
GO:0031323 regulation of cellular metabolic process 9.18% (9/98) 1.39 0.007607 0.035433
GO:0060255 regulation of macromolecule metabolic process 9.18% (9/98) 1.39 0.007541 0.036076
GO:0003824 catalytic activity 30.61% (30/98) 0.64 0.00606 0.036986
GO:0019219 regulation of nucleobase-containing compound metabolic process 9.18% (9/98) 1.44 0.006035 0.03815
GO:0004325 ferrochelatase activity 1.02% (1/98) 7.71 0.004786 0.038505
GO:0065007 biological regulation 11.22% (11/98) 1.27 0.005946 0.038981
GO:0051252 regulation of RNA metabolic process 9.18% (9/98) 1.45 0.005791 0.03942
GO:0006355 regulation of DNA-templated transcription 9.18% (9/98) 1.45 0.005711 0.040433
GO:2001141 regulation of RNA biosynthetic process 9.18% (9/98) 1.45 0.005711 0.040433
GO:0050789 regulation of biological process 11.22% (11/98) 1.28 0.005484 0.042203
GO:0003674 molecular_function 53.06% (52/98) 0.37 0.010437 0.046182
GO:0071704 organic substance metabolic process 21.43% (21/98) 0.75 0.010809 0.046666
GO:0046148 pigment biosynthetic process 1.02% (1/98) 6.38 0.011922 0.046894
GO:0004867 serine-type endopeptidase inhibitor activity 1.02% (1/98) 6.38 0.011922 0.046894
GO:0008150 biological_process 34.69% (34/98) 0.53 0.011248 0.047401
GO:0016757 glycosyltransferase activity 5.1% (5/98) 1.89 0.011568 0.047616
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_1 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_7 0.025 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_8 0.018 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_10 0.045 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_11 0.016 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_21 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_29 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_35 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_46 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_47 0.032 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_65 0.015 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_72 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_85 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_90 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_98 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_100 0.017 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_106 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_110 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_113 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_115 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_118 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_137 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_164 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_176 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_195 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_204 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_217 0.033 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_226 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_227 0.016 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_229 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_232 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_239 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_245 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_250 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_251 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_261 0.023 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_262 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_268 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_401 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_26 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_59 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_79 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_176 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_48 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_52 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_61 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_155 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_178 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (98) (download table)

InterPro Domains

GO Terms

Family Terms