Coexpression cluster: Cluster_52 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003674 molecular_function 51.28% (100/195) 0.79 0.0 0.0
GO:0036094 small molecule binding 14.87% (29/195) 1.65 0.0 7e-06
GO:0016740 transferase activity 14.36% (28/195) 1.56 0.0 1.9e-05
GO:0016301 kinase activity 9.74% (19/195) 2.03 0.0 2.1e-05
GO:0043168 anion binding 13.85% (27/195) 1.61 0.0 2.7e-05
GO:0000166 nucleotide binding 13.33% (26/195) 1.55 1e-06 3.5e-05
GO:1901265 nucleoside phosphate binding 13.33% (26/195) 1.55 1e-06 3.5e-05
GO:0009987 cellular process 21.54% (42/195) 1.15 1e-06 3.5e-05
GO:0036211 protein modification process 9.74% (19/195) 1.87 1e-06 4.2e-05
GO:0016310 phosphorylation 8.72% (17/195) 1.99 2e-06 4.3e-05
GO:0017076 purine nucleotide binding 12.82% (25/195) 1.56 1e-06 4.4e-05
GO:0008150 biological_process 28.72% (56/195) 0.89 2e-06 4.4e-05
GO:0006468 protein phosphorylation 8.72% (17/195) 1.99 2e-06 4.4e-05
GO:0016773 phosphotransferase activity, alcohol group as acceptor 9.23% (18/195) 1.97 1e-06 4.4e-05
GO:0004672 protein kinase activity 8.72% (17/195) 1.96 2e-06 4.5e-05
GO:0016772 transferase activity, transferring phosphorus-containing groups 9.74% (19/195) 1.82 2e-06 4.7e-05
GO:0043412 macromolecule modification 9.74% (19/195) 1.79 3e-06 5.3e-05
GO:0016020 membrane 10.26% (20/195) 1.74 3e-06 5.3e-05
GO:0005488 binding 32.82% (64/195) 0.78 3e-06 5.8e-05
GO:0032555 purine ribonucleotide binding 11.79% (23/195) 1.53 5e-06 8.5e-05
GO:0032553 ribonucleotide binding 11.79% (23/195) 1.52 6e-06 9.5e-05
GO:0097367 carbohydrate derivative binding 11.79% (23/195) 1.51 7e-06 0.0001
GO:0030554 adenyl nucleotide binding 11.28% (22/195) 1.55 7e-06 0.000105
GO:0006793 phosphorus metabolic process 8.72% (17/195) 1.74 1.6e-05 0.000197
GO:0006796 phosphate-containing compound metabolic process 8.72% (17/195) 1.74 1.6e-05 0.000197
GO:0043167 ion binding 17.95% (35/195) 1.09 1.5e-05 0.000207
GO:0032182 ubiquitin-like protein binding 1.54% (3/195) 5.75 2e-05 0.000234
GO:0043130 ubiquitin binding 1.54% (3/195) 5.75 2e-05 0.000234
GO:0003824 catalytic activity 27.18% (53/195) 0.81 2.2e-05 0.000246
GO:0032559 adenyl ribonucleotide binding 10.26% (20/195) 1.5 3e-05 0.000322
GO:0006810 transport 7.69% (15/195) 1.72 5.9e-05 0.000616
GO:0051234 establishment of localization 7.69% (15/195) 1.72 6.1e-05 0.000622
GO:0051179 localization 7.69% (15/195) 1.69 7.3e-05 0.000698
GO:0035639 purine ribonucleoside triphosphate binding 10.26% (20/195) 1.41 7.2e-05 0.000712
GO:0110165 cellular anatomical entity 11.28% (22/195) 1.26 0.000137 0.001277
GO:0040008 regulation of growth 1.03% (2/195) 6.48 0.000185 0.001632
GO:0045927 positive regulation of growth 1.03% (2/195) 6.48 0.000185 0.001632
GO:0140096 catalytic activity, acting on a protein 10.26% (20/195) 1.29 0.000223 0.001911
GO:0035091 phosphatidylinositol binding 1.54% (3/195) 4.61 0.000245 0.002049
GO:0005515 protein binding 11.28% (22/195) 1.2 0.00026 0.002122
GO:0004470 malic enzyme activity 1.03% (2/195) 6.16 0.000308 0.002279
GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity 1.03% (2/195) 6.16 0.000308 0.002279
GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor 1.03% (2/195) 6.16 0.000308 0.002279
GO:0016615 malate dehydrogenase activity 1.03% (2/195) 6.16 0.000308 0.002279
GO:0005524 ATP binding 8.72% (17/195) 1.36 0.000385 0.00279
GO:0005575 cellular_component 11.79% (23/195) 1.09 0.000539 0.003739
GO:0005215 transporter activity 5.64% (11/195) 1.73 0.000534 0.003783
GO:0016491 oxidoreductase activity 6.67% (13/195) 1.54 0.000625 0.004244
GO:0008289 lipid binding 2.05% (4/195) 3.35 0.000651 0.004334
GO:0043021 ribonucleoprotein complex binding 1.03% (2/195) 5.48 0.000852 0.005554
GO:1901363 heterocyclic compound binding 20.0% (39/195) 0.72 0.001118 0.007007
GO:0097159 organic cyclic compound binding 20.0% (39/195) 0.72 0.001118 0.007007
GO:0005543 phospholipid binding 1.54% (3/195) 3.78 0.001356 0.008343
GO:0019538 protein metabolic process 10.26% (20/195) 1.06 0.00155 0.009357
GO:0022857 transmembrane transporter activity 5.13% (10/195) 1.62 0.001742 0.010325
GO:0055085 transmembrane transport 5.13% (10/195) 1.6 0.0019 0.011062
GO:0048518 positive regulation of biological process 1.03% (2/195) 4.9 0.001979 0.011316
GO:0005516 calmodulin binding 1.03% (2/195) 4.68 0.002708 0.015221
GO:0070279 vitamin B6 binding 1.54% (3/195) 3.4 0.002943 0.015988
GO:0030170 pyridoxal phosphate binding 1.54% (3/195) 3.4 0.002943 0.015988
GO:0043565 sequence-specific DNA binding 2.05% (4/195) 2.66 0.003798 0.020295
GO:0019842 vitamin binding 1.54% (3/195) 3.23 0.004034 0.021213
GO:0048487 beta-tubulin binding 0.51% (1/195) 7.48 0.005591 0.025317
GO:0007021 tubulin complex assembly 0.51% (1/195) 7.48 0.005591 0.025317
GO:0042255 ribosome assembly 0.51% (1/195) 7.48 0.005591 0.025317
GO:0005785 signal recognition particle receptor complex 0.51% (1/195) 7.48 0.005591 0.025317
GO:0042256 cytosolic ribosome assembly 0.51% (1/195) 7.48 0.005591 0.025317
GO:0007023 post-chaperonin tubulin folding pathway 0.51% (1/195) 7.48 0.005591 0.025317
GO:0016603 glutaminyl-peptide cyclotransferase activity 0.51% (1/195) 7.48 0.005591 0.025317
GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase 0.51% (1/195) 7.48 0.005591 0.025317
GO:0018199 peptidyl-glutamine modification 0.51% (1/195) 7.48 0.005591 0.025317
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 1.54% (3/195) 3.09 0.005343 0.027649
GO:0044237 cellular metabolic process 11.28% (22/195) 0.81 0.007267 0.032451
GO:1901564 organonitrogen compound metabolic process 10.26% (20/195) 0.85 0.007814 0.033966
GO:0043531 ADP binding 1.54% (3/195) 2.9 0.007736 0.034081
GO:0016651 oxidoreductase activity, acting on NAD(P)H 1.03% (2/195) 3.73 0.009959 0.042718
GO:0005047 signal recognition particle binding 0.51% (1/195) 6.48 0.011152 0.046608
GO:0004869 cysteine-type endopeptidase inhibitor activity 0.51% (1/195) 6.48 0.011152 0.046608
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_85 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_156 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_176 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_7 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_8 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_11 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_22 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_27 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_30 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_44 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_45 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_51 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_61 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_62 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_64 0.016 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_68 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_70 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_73 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_76 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_88 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_93 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_94 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_99 0.016 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_121 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_124 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_133 0.017 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_166 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_237 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (195) (download table)

InterPro Domains

GO Terms

Family Terms