Coexpression cluster: Cluster_102 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016874 ligase activity 3.89% (7/180) 3.7 1e-06 0.000406
GO:0005975 carbohydrate metabolic process 6.11% (11/180) 2.45 6e-06 0.000727
GO:0006399 tRNA metabolic process 3.33% (6/180) 3.83 4e-06 0.000739
GO:0003723 RNA binding 6.11% (11/180) 2.34 1.3e-05 0.001114
GO:0003674 molecular_function 43.89% (79/180) 0.57 3.1e-05 0.001486
GO:0016741 transferase activity, transferring one-carbon groups 3.89% (7/180) 3.01 2.9e-05 0.001596
GO:0140101 catalytic activity, acting on a tRNA 2.78% (5/180) 3.67 4.8e-05 0.001599
GO:0034660 ncRNA metabolic process 3.33% (6/180) 3.28 3.9e-05 0.001639
GO:0016885 ligase activity, forming carbon-carbon bonds 1.11% (2/180) 7.01 7.9e-05 0.001663
GO:0016421 CoA carboxylase activity 1.11% (2/180) 7.01 7.9e-05 0.001663
GO:0003989 acetyl-CoA carboxylase activity 1.11% (2/180) 7.01 7.9e-05 0.001663
GO:0044281 small molecule metabolic process 5.0% (9/180) 2.45 4.6e-05 0.0017
GO:0009317 acetyl-CoA carboxylase complex 1.11% (2/180) 7.6 2.6e-05 0.00178
GO:0006082 organic acid metabolic process 3.89% (7/180) 2.8 7.3e-05 0.001895
GO:0043436 oxoacid metabolic process 3.89% (7/180) 2.81 7.1e-05 0.001987
GO:0019752 carboxylic acid metabolic process 3.89% (7/180) 2.81 7.1e-05 0.001987
GO:0016423 tRNA (guanine) methyltransferase activity 1.11% (2/180) 6.6 0.000158 0.002947
GO:0016743 carboxyl- or carbamoyltransferase activity 1.11% (2/180) 6.6 0.000158 0.002947
GO:0008152 metabolic process 18.89% (34/180) 0.92 0.000199 0.003515
GO:0008173 RNA methyltransferase activity 1.67% (3/180) 4.54 0.000286 0.004805
GO:0036094 small molecule binding 11.11% (20/180) 1.23 0.000352 0.004927
GO:0017076 purine nucleotide binding 10.56% (19/180) 1.28 0.000327 0.004993
GO:0003824 catalytic activity 25.56% (46/180) 0.72 0.000345 0.005043
GO:0008033 tRNA processing 1.67% (3/180) 4.48 0.000322 0.005154
GO:0008175 tRNA methyltransferase activity 1.11% (2/180) 6.01 0.000392 0.005268
GO:0032555 purine ribonucleotide binding 10.0% (18/180) 1.3 0.000429 0.005546
GO:0043168 anion binding 10.56% (19/180) 1.22 0.000546 0.005738
GO:0097367 carbohydrate derivative binding 10.0% (18/180) 1.27 0.000518 0.0058
GO:0005488 binding 29.44% (53/180) 0.63 0.000502 0.005817
GO:0016070 RNA metabolic process 4.44% (8/180) 2.15 0.000489 0.005863
GO:0000166 nucleotide binding 10.56% (19/180) 1.21 0.000594 0.005871
GO:1901265 nucleoside phosphate binding 10.56% (19/180) 1.21 0.000594 0.005871
GO:0071704 organic substance metabolic process 17.22% (31/180) 0.9 0.000545 0.005912
GO:0032553 ribonucleotide binding 10.0% (18/180) 1.28 0.000481 0.005991
GO:0035639 purine ribonucleoside triphosphate binding 9.44% (17/180) 1.29 0.000637 0.006112
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds 3.89% (7/180) 2.24 0.000765 0.007139
GO:0006396 RNA processing 2.78% (5/180) 2.78 0.00085 0.007721
GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor 1.11% (2/180) 5.28 0.00116 0.009995
GO:0008150 biological_process 24.44% (44/180) 0.66 0.001131 0.010002
GO:0044283 small molecule biosynthetic process 2.22% (4/180) 3.11 0.001241 0.010171
GO:0016798 hydrolase activity, acting on glycosyl bonds 3.89% (7/180) 2.12 0.001218 0.01023
GO:0005525 GTP binding 2.78% (5/180) 2.6 0.001492 0.011138
GO:0008168 methyltransferase activity 2.78% (5/180) 2.6 0.001492 0.011138
GO:0032561 guanyl ribonucleotide binding 2.78% (5/180) 2.6 0.001492 0.011138
GO:0044238 primary metabolic process 16.11% (29/180) 0.85 0.001415 0.011321
GO:0016868 intramolecular transferase activity, phosphotransferases 1.11% (2/180) 5.01 0.00169 0.012081
GO:0019001 guanyl nucleotide binding 2.78% (5/180) 2.56 0.001663 0.012145
GO:0006418 tRNA aminoacylation for protein translation 1.67% (3/180) 3.63 0.001855 0.012988
GO:0043167 ion binding 15.0% (27/180) 0.83 0.002357 0.016159
GO:0006400 tRNA modification 1.11% (2/180) 4.69 0.002661 0.017884
GO:0097159 organic cyclic compound binding 19.44% (35/180) 0.68 0.003162 0.018973
GO:1901363 heterocyclic compound binding 19.44% (35/180) 0.68 0.003162 0.018973
GO:0043039 tRNA aminoacylation 1.67% (3/180) 3.38 0.003066 0.019078
GO:0043038 amino acid activation 1.67% (3/180) 3.38 0.003066 0.019078
GO:0016875 ligase activity, forming carbon-oxygen bonds 1.67% (3/180) 3.38 0.003066 0.019078
GO:0004812 aminoacyl-tRNA ligase activity 1.67% (3/180) 3.38 0.003066 0.019078
GO:0006520 amino acid metabolic process 2.22% (4/180) 2.67 0.003756 0.021758
GO:0032787 monocarboxylic acid metabolic process 1.67% (3/180) 3.28 0.003728 0.021978
GO:0016553 base conversion or substitution editing 0.56% (1/180) 7.6 0.005161 0.023756
GO:0002100 tRNA wobble adenosine to inosine editing 0.56% (1/180) 7.6 0.005161 0.023756
GO:0006382 adenosine to inosine editing 0.56% (1/180) 7.6 0.005161 0.023756
GO:0008251 tRNA-specific adenosine deaminase activity 0.56% (1/180) 7.6 0.005161 0.023756
GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity 0.56% (1/180) 7.6 0.005161 0.023756
GO:0010275 NAD(P)H dehydrogenase complex assembly 0.56% (1/180) 7.6 0.005161 0.023756
GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly 0.56% (1/180) 7.6 0.005161 0.023756
GO:0140673 transcription elongation-coupled chromatin remodeling 0.56% (1/180) 7.6 0.005161 0.023756
GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity 0.56% (1/180) 7.6 0.005161 0.023756
GO:0004000 adenosine deaminase activity 0.56% (1/180) 7.6 0.005161 0.023756
GO:0006633 fatty acid biosynthetic process 1.11% (2/180) 4.35 0.004276 0.024351
GO:0043933 protein-containing complex organization 1.67% (3/180) 3.18 0.004472 0.024631
GO:0034470 ncRNA processing 1.67% (3/180) 3.18 0.004472 0.024631
GO:0072330 monocarboxylic acid biosynthetic process 1.11% (2/180) 4.14 0.005718 0.025962
GO:0016053 organic acid biosynthetic process 1.67% (3/180) 3.12 0.005084 0.027114
GO:0046394 carboxylic acid biosynthetic process 1.67% (3/180) 3.12 0.005084 0.027114
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 1.11% (2/180) 4.07 0.006241 0.027961
GO:0016866 intramolecular transferase activity 1.11% (2/180) 3.79 0.009169 0.040535
GO:0004809 tRNA (guanine-N2-)-methyltransferase activity 0.56% (1/180) 6.6 0.010296 0.041681
GO:0008176 tRNA (guanine-N7-)-methyltransferase activity 0.56% (1/180) 6.6 0.010296 0.041681
GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen 0.56% (1/180) 6.6 0.010296 0.041681
GO:0006788 heme oxidation 0.56% (1/180) 6.6 0.010296 0.041681
GO:0004392 heme oxygenase (decyclizing) activity 0.56% (1/180) 6.6 0.010296 0.041681
GO:0030554 adenyl nucleotide binding 7.78% (14/180) 1.01 0.010457 0.041828
GO:0006631 fatty acid metabolic process 1.11% (2/180) 3.74 0.009815 0.042279
GO:0046483 heterocycle metabolic process 5.56% (10/180) 1.26 0.009705 0.042347
GO:1901360 organic cyclic compound metabolic process 5.56% (10/180) 1.23 0.011019 0.043558
GO:0016879 ligase activity, forming carbon-nitrogen bonds 1.11% (2/180) 3.64 0.011166 0.043623
GO:0044237 cellular metabolic process 11.11% (20/180) 0.79 0.011877 0.045868
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_258 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_13 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_52 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_133 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_148 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_226 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_5 0.018 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_9 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_10 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_11 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_16 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_18 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_19 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_21 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_22 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_23 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_25 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_26 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_28 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_29 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_32 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_35 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_36 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_38 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_40 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_45 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_47 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_49 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_59 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_62 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_65 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_66 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_67 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_69 0.017 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_70 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_72 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_74 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_75 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_77 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_78 0.015 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_81 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_88 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_92 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_93 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_94 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_97 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_100 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_101 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_121 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_123 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_139 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_148 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_152 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_175 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_198 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_228 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (180) (download table)

InterPro Domains

GO Terms

Family Terms