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  5. Lsat_1_v5_gn_6_71461.1

Lsat_1_v5_gn_6_71461.1 (TIF3H1)


Aliases : TIF3H1

Description : component *(eIF3h) of eIF3 mRNA-to-PIC binding complex


Gene families : OG0001925 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001925_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_71461.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Bra019898 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra031745 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0002.00060 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008233 peptidase activity IEA Interproscan
MF GO:0008237 metallopeptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0000166 nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0002097 tRNA wobble base modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0002098 tRNA wobble uridine modification IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003735 structural constituent of ribosome IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003743 translation initiation factor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004827 proline-tRNA ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006412 translation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006413 translational initiation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006418 tRNA aminoacylation for protein translation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006433 prolyl-tRNA aminoacylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006520 amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006606 protein import into nucleus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006913 nucleocytoplasmic transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016597 amino acid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030684 preribosome IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031369 translation initiation factor binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031406 carboxylic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0032040 small-subunit processome IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0033588 elongator holoenzyme complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0034457 Mpp10 complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034504 protein localization to nucleus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043038 amino acid activation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043039 tRNA aminoacylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043177 organic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043226 organelle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043603 amide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051169 nuclear transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051170 import into nucleus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0061608 nuclear import signal receptor activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140101 catalytic activity, acting on a tRNA IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140104 molecular carrier activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140142 nucleocytoplasmic carrier activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 25 128
IPR045810 eIF3h_C 145 337
No external refs found!