Lsat_1_v5_gn_6_15101.1 (rps15ab)


Aliases : rps15ab

Description : component *(uS8) of small ribosomal-subunit (SSU) proteome. component *(uS8m) of small mitoribosomal-subunit proteome


Gene families : OG0039612 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_15101.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_47


Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003743 translation initiation factor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003746 translation elongation factor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004814 arginine-tRNA ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005488 binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006413 translational initiation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006414 translational elongation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006417 regulation of translation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006418 tRNA aminoacylation for protein translation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006420 arginyl-tRNA aminoacylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006448 regulation of translational elongation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006449 regulation of translational termination IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006520 amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008097 5S rRNA binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009891 positive regulation of biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009893 positive regulation of metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010608 post-transcriptional regulation of gene expression IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010628 positive regulation of gene expression IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016579 protein deubiquitination IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019843 rRNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031325 positive regulation of cellular metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034248 regulation of amide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034250 positive regulation of amide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043021 ribonucleoprotein complex binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043022 ribosome binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043038 amino acid activation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043039 tRNA aminoacylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043244 regulation of protein-containing complex disassembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045727 positive regulation of translation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045901 positive regulation of translational elongation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045905 positive regulation of translational termination IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048518 positive regulation of biological process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048522 positive regulation of cellular process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051020 GTPase binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051128 regulation of cellular component organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051130 positive regulation of cellular component organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051246 regulation of protein metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051247 positive regulation of protein metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070646 protein modification by small protein removal IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140101 catalytic activity, acting on a tRNA IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000630 Ribosomal_uS8 6 129
No external refs found!