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  5. Lsat_1_v5_gn_1_8961.1

Lsat_1_v5_gn_1_8961.1 (KOR, RSW2, TSD1,...)


Aliases : KOR, RSW2, TSD1, GH9A1, DEC, KOR1, ATGH9A1, IRX2

Description : not classified


Gene families : OG0040770 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_8961.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_14


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000097 sulfur amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000154 rRNA modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0001510 RNA methylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004358 glutamate N-acetyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004559 alpha-mannosidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005319 lipid transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005667 transcription regulator complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005669 transcription factor TFIID complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006013 mannose metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006520 amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006525 arginine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006526 arginine biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006534 cysteine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006535 cysteine biosynthetic process from serine IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006563 L-serine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006790 sulfur compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006869 lipid transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008080 N-acetyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008170 N-methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0008290 F-actin capping protein complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008374 O-acyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008649 rRNA methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008652 amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0009001 serine O-acetyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009064 glutamine family amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009069 serine family amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009070 serine family amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010639 negative regulation of organelle organization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015923 mannosidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016407 acetyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016410 N-acyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016412 serine O-acyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016413 O-acetyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016746 acyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019318 hexose metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019344 cysteine biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030832 regulation of actin filament length IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030833 regulation of actin filament polymerization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030834 regulation of actin filament depolymerization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030835 negative regulation of actin filament depolymerization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030837 negative regulation of actin filament polymerization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031167 rRNA methylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031333 negative regulation of protein-containing complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032271 regulation of protein polymerization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032272 negative regulation of protein polymerization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032535 regulation of cellular component size IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032956 regulation of actin cytoskeleton organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032970 regulation of actin filament-based process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033043 regulation of organelle organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043244 regulation of protein-containing complex disassembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043254 regulation of protein-containing complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044087 regulation of cellular component biogenesis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044272 sulfur compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051016 barbed-end actin filament capping IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051128 regulation of cellular component organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051129 negative regulation of cellular component organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051493 regulation of cytoskeleton organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051494 negative regulation of cytoskeleton organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051693 actin filament capping IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0061024 membrane organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065008 regulation of biological quality IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070475 rRNA base methylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0090066 regulation of anatomical structure size IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0110053 regulation of actin filament organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0120009 intermembrane lipid transfer IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0120013 lipid transfer activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140102 catalytic activity, acting on a rRNA IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901605 alpha-amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901607 alpha-amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901879 regulation of protein depolymerization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901880 negative regulation of protein depolymerization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1902903 regulation of supramolecular fiber organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1902904 negative regulation of supramolecular fiber organization IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 129 598
No external refs found!