Heatmap: Cluster_14 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
- - 1.02 - 1.52 0.64 - - - 0.22 0.19 - - - -1.48 -0.38 - 2.09 - 0.42 -0.41 2.13 1.42 0.14 - -1.0 1.48 - 1.55 - -1.39
- 0.1 -0.62 -1.64 1.22 -0.34 - -0.92 0.86 -0.99 0.19 0.19 -0.79 0.62 -0.81 -0.13 -0.28 -1.25 -1.04 0.43 -1.04 0.56 -0.0 -0.59 -1.99 -0.17 0.58 -0.88 2.21 0.9 -0.43
- - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.95 - -
- - - - - - - - - - - - - - - - - - - - - 4.95 - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.95 - -
- -0.43 -1.37 0.6 -0.24 0.79 -0.85 -0.29 -1.12 -0.05 0.16 -1.18 0.71 0.76 0.58 -0.45 - 0.08 -0.18 0.24 -0.63 1.06 -0.33 0.27 -1.19 -0.32 -2.54 -0.93 1.38 0.75 0.84
- - - - - - - - 3.9 - - - - - - - - - - - - - - - - - - - 4.0 - -
1.55 0.43 - - 1.61 -0.03 - - - - - - 2.04 - 0.45 - 0.41 1.34 - - - 3.02 - - 0.34 0.37 0.5 - - - 0.33
- - - - - - - - - - - - - - - - - - - - - 4.95 - - - - - - - - -
- - - - - - - - - - - - - - - - - - 3.36 - - 3.36 - - - - - - - - 3.39
0.93 0.97 - - - - 0.76 1.69 0.61 0.73 0.71 - 0.78 - - - 0.75 - 1.03 - - - 0.68 - - - - - 2.89 1.56 -
- - - 1.79 - 1.47 0.55 - 1.96 - - - 0.42 0.58 - 0.83 0.58 2.79 - - - 1.93 - - - - - - 0.41 0.34 -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.95 - -
- - - - 1.9 3.78 - - - - - - - - - - - - - - - 3.26 - - 0.93 - - 1.03 - - -
- - - - - - - - - - - - 2.74 - - - 1.45 2.45 - - - - - - - - 1.5 - 2.55 - 2.89
- - - - 0.44 1.68 - - 1.2 - - - - 2.99 1.87 - 1.26 - - - 1.49 2.06 -0.28 - - -0.28 - - 0.63 - -
- - - - - - - - - - - - - - - - - - - 2.83 - - 3.12 - - - - - 3.93 - -
- - - - - - - - - - - - - - - - - - - - - - - - - 3.44 - - 4.33 - -
- 0.31 - - -0.1 -0.17 - - 0.04 2.13 - - - 1.05 2.4 - - 0.81 2.25 - - - 0.01 - - - 1.11 - 1.39 0.13 0.86
- -0.39 - 2.37 - 1.19 -0.4 -0.92 - - - - - -0.63 -0.51 0.46 -0.83 0.11 - 0.87 - 2.16 -0.72 0.62 -0.92 0.98 - -0.73 1.22 -0.93 1.46
- - - - - 2.33 - - - - - - - - - - - - - - 2.22 4.41 - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.95 - -
- -0.79 - 0.13 -1.13 0.89 -0.93 -1.12 0.64 -1.74 0.94 0.54 0.52 0.43 1.7 -0.0 1.17 - 0.48 -2.0 -0.5 0.74 -1.78 -1.01 0.04 -1.91 -0.39 -1.1 1.05 0.69 -0.94
- - - - 2.65 2.7 - - - - - - 2.67 - - - - - - - - - - - - - - - 3.57 - -
- - - - - - - - - - - - - - - - - - - - - 4.95 - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - 4.95 - - - - - - - - -
0.74 1.53 -1.67 -1.66 0.65 -0.07 - -0.6 -1.27 -2.2 -1.98 -2.28 1.04 0.19 -0.82 -1.94 -1.32 -1.94 -0.01 0.56 - 0.73 -1.73 -0.93 1.92 -1.84 - -2.17 2.16 0.26 0.97
- - - - - - - - - - - - - - - - - - - - - - 3.41 - - - - - 3.77 - 2.76
-1.33 - - - 0.16 1.06 -1.73 0.05 -0.74 0.54 0.35 1.19 - 0.75 1.22 0.16 -0.13 - 0.64 -1.9 0.77 2.51 - -1.81 - 1.25 0.79 -0.96 - - -1.76
-1.37 0.55 1.33 0.85 -0.11 - -0.03 2.66 1.02 0.02 -0.93 - - - - - - 1.46 - - - - - 0.53 - - - - 2.27 1.02 1.01
- - - - - - - - - 1.65 - - - - - 0.87 1.83 - - 2.53 - 3.26 - - - - - - - 1.68 1.97
- - 0.18 - 0.77 0.0 - -0.15 - - - - 0.33 - 0.26 - -0.05 2.42 - 1.4 - - 2.0 - - - - - 3.0 -0.09 0.97
-1.14 - -1.85 - 0.77 -2.2 0.15 0.46 0.12 -0.44 -1.92 0.05 -0.49 -1.01 0.26 0.01 -0.69 1.12 -0.02 -1.11 0.99 1.11 -0.51 0.15 -1.95 -0.6 0.04 -0.45 -0.64 1.52 1.56
- -0.4 - -0.33 0.71 -0.77 -0.31 - 0.16 - - - 0.35 -0.55 - - -0.72 - - 1.09 -0.95 2.4 - 1.26 1.53 -0.89 -0.51 - 0.24 2.17 1.39
- - - - - - 3.01 - - - - - - - - - - 3.52 - - - - - - - - - - 3.52 - -
- - - - - - - - - - - - - - - - 3.91 - - - - 4.0 - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - 4.95 - - - - - - - - -
- - - -0.33 -0.63 0.3 - - - -0.7 0.44 - -0.4 1.49 0.53 0.49 -0.64 0.85 - - - - 0.97 - 0.87 -0.82 -0.5 - 2.13 2.22 1.75
- - - 1.72 -0.6 0.49 -0.65 - - - - 0.72 - 1.63 - -0.08 0.72 -0.1 - -0.22 -0.07 0.41 1.02 - 0.95 - - - 2.19 0.83 1.7
- - - - - - - - - - - - - - - - - - - - - 4.95 - - - - - - - - -
- - - - - - - - - - - 0.39 1.56 - 0.74 -0.01 - 1.28 - - - 2.31 1.9 0.49 -0.52 - - - 0.55 - 3.23
0.85 - - - - 1.47 - 0.69 1.62 - - - - 1.85 - 0.62 0.49 1.39 - - - 1.62 - - - 2.08 - - 2.4 - -
- 2.4 - - 1.95 - - - - 2.8 - - - - 2.12 - - 1.8 - - - - - - - - - - 2.82 - -
- - - - 2.09 - - - - - - - - 2.26 - - - 2.99 - - - 3.03 - - - - - - - - 2.55
- - - 3.65 - - - - - - - - - - - - - - - - - 4.21 - - - - - - - - -
- - - - - - - - - - - - - - - 2.73 - - - - - - 2.42 - - - - - 4.25 - -
-0.23 - - 1.33 -4.22 1.04 -4.44 0.54 -0.5 -3.54 1.08 1.86 2.25 -1.06 - - - - -1.73 0.35 -3.32 -1.49 -1.08 -0.22 - -0.89 -0.64 - 2.27 - 1.54
0.6 - -0.39 -0.48 -0.74 -0.21 0.92 0.06 - -0.75 - - 0.3 - 0.43 -1.43 0.29 -1.79 - - - 2.19 0.06 - -0.81 1.59 -1.5 1.04 1.59 -0.2 1.62
-0.7 -0.94 -0.98 -0.23 -0.02 -0.03 -0.04 -0.34 0.18 0.52 0.6 0.22 -0.33 0.28 1.14 0.02 0.64 -0.31 -0.08 -0.02 -0.16 0.4 -0.01 -0.83 -0.21 -0.73 -0.45 -0.48 0.42 0.13 -0.16
- - - - -0.47 -0.54 - - -0.67 - - - - - - - -0.29 1.75 -0.12 - 0.88 1.79 1.99 2.09 - -0.78 1.65 0.61 1.21 1.05 -0.52
- - - 2.3 - - - - - - - - - - - - - - - - - - - - 3.48 - - - 3.9 - -
- - - - - - - - - - - - 3.28 - - - - - - - - - - - - - - - 4.41 - -
- - - - - - - - - - - - - 4.23 - - - - - - - 3.26 - - - - 1.42 - - - -
- - - - - -0.73 - - - - - 1.24 - - - 1.24 -0.46 1.15 - - 0.08 2.38 0.2 1.15 - 1.22 2.07 0.92 - - 2.22
- - - - - - - - - - - - 3.87 - - - - - - 2.47 - - - - - - - - 3.44 - -
- - - - - - - - 2.17 - - - - - 0.83 - - 0.63 3.07 - - - - - - - 1.94 - 3.23 - 0.69
0.23 -0.18 - -0.2 0.1 -0.41 0.16 - -0.22 0.19 -0.08 0.91 -0.12 1.08 -1.22 -0.69 -0.52 -1.93 0.05 -1.84 0.27 2.18 -0.75 -1.12 0.51 -0.82 0.44 -1.12 0.71 0.12 -0.68
-0.41 -1.77 -0.87 -0.23 -0.16 0.21 -0.24 0.37 -0.21 -0.23 -0.28 -0.71 -0.87 0.21 0.06 0.03 0.39 0.59 0.68 0.35 0.42 1.0 -3.6 0.03 -0.38 0.83 0.27 0.07 0.37 -0.51 -0.91
- - - - - - - - - -22.81 - 1.5 -8.48 - - - - - - - -17.53 3.95 1.61 - 2.85 -11.61 -26.97 - - 1.29 -
- -0.66 - 1.55 -0.2 1.2 -0.96 - -1.31 -0.17 - 0.36 1.43 0.26 - 0.62 0.07 1.88 - 1.11 0.29 1.02 - -1.18 - -1.27 -1.3 - - 0.91 1.3
-0.81 - 1.87 -0.28 -0.34 1.02 - 0.42 - - -1.99 -1.14 1.18 0.99 0.93 1.5 - - - -0.17 - 1.69 - -0.16 -2.09 - -1.9 -1.32 -2.03 1.19 1.87
- - - - - - - - - - - - - - - - - - 3.63 - - - - - - - - - - - 4.22
-0.65 0.15 -0.19 -0.5 -0.63 -1.0 0.4 0.03 -0.06 0.16 0.46 -0.13 -0.12 -0.4 -0.62 -0.42 -0.3 -0.77 -0.6 -0.92 -0.31 -0.56 -2.79 -1.41 -0.31 -0.02 -0.57 -0.4 2.0 1.48 1.09
- - - - - - - - - - - - - - - - - 1.94 - - - - - - - - - - 4.44 2.44 -
- - - - - - - - 0.29 - - - 0.43 2.26 1.63 - - 1.78 - - - - 1.99 0.36 - - - - 2.34 2.06 1.38
- - 2.58 - - - - - - - - - - - - 3.29 - - - - - 3.93 - - - - - - - - -
- - 1.17 - - - - - - - - - - - - - - - - - - - - - - - - - 4.85 - -
- -1.23 -1.32 - 1.72 1.12 0.31 1.33 0.44 -1.68 0.08 -2.64 -0.56 -0.27 0.71 0.39 -1.45 -0.25 -0.85 0.19 -0.77 0.37 - -0.46 -2.73 -1.94 -0.11 -0.79 1.62 0.25 0.96
0.34 - - 2.25 -0.28 -0.07 -0.06 - 0.12 - - - 1.11 1.23 - 0.22 1.69 1.29 - 0.79 - 2.24 - - - - - - 0.07 - 1.2
- - - - - - - - - - - - - - - 2.05 - 2.68 - - - - - - - - - - 4.09 - 1.78
- - - - - - - - - - - - - - - - - - - - - 4.95 - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - 0.71 3.47 - - - - 0.75 - 3.19 - 2.91
- - - - - - - - - - - - - - - - - - - - 0.71 3.47 - - - - 0.75 - 3.19 - 2.91
- - - - - - - - - - - - - - - - - - - - - 4.95 - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.95 - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.95 - -
- - - - - 3.15 - - - - - - 1.11 - - 2.39 - - 1.74 - - 3.51 - - - - - - - - -
-0.57 0.46 -1.38 -0.43 -1.35 -0.74 0.09 -0.29 0.97 -1.28 - -1.14 0.38 1.15 0.81 -0.4 -0.16 1.35 - 1.23 -1.26 1.59 1.32 -1.86 -0.25 -1.34 0.64 -2.76 - -2.31 -0.09
- - - - - - - - - - - - - - - - - 1.41 - - - - - - 3.57 - - - 4.04 - -
- 0.94 - - - 0.46 0.64 0.39 - - - 0.66 - 0.77 2.83 - 0.32 -0.59 - -0.71 - 2.44 - - - -0.81 - -0.48 1.5 0.44 -0.03
- - - - - - - - -1.31 2.02 1.71 1.35 1.22 0.62 2.51 0.12 -0.1 - -0.26 1.28 - 0.15 - 0.77 0.78 - - - - - 0.43
- - - - - - - - - - - - - - 2.65 - 1.49 1.27 - - - - 2.99 - - - - - 3.53 - -
- - - - - - - - - - - - - 2.35 - - - - - - 2.01 3.14 - - - 3.03 - - 2.3 - -
- 0.19 - 0.18 - - 0.03 - - - 0.98 - 0.16 - - 0.34 1.45 - - - 0.67 2.44 - - - 0.73 2.44 -0.09 - 1.92 0.86
-2.43 -1.61 -1.48 0.71 0.04 -0.28 0.4 0.29 -0.28 0.59 0.36 -1.02 -0.88 0.32 0.39 0.18 0.02 -0.63 0.45 0.0 -0.71 -0.08 0.24 -0.14 -0.19 0.31 -0.13 -0.5 1.03 -0.8 0.8
- - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.95 - -
-0.79 -0.41 -0.84 0.3 0.38 0.66 0.21 0.43 -0.52 -0.44 0.53 -0.43 -1.08 -0.05 0.05 0.96 0.11 - -0.16 0.16 -0.53 1.48 -1.88 0.04 0.55 0.05 -0.46 -0.23 0.11 0.03 -1.31
- - -3.13 1.23 -0.58 -0.27 -0.43 -1.11 -0.81 -0.27 0.7 0.56 -0.49 1.0 0.48 -0.18 0.2 1.03 -1.8 -1.76 0.2 0.6 -2.21 -3.33 -0.12 -0.25 0.51 -3.57 0.14 0.85 1.78

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.