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  5. Bra035826

Bra035826 (TOM40)


Aliases : TOM40

Description : channel-forming component *(Tom40) of outer mitochondrion membrane TOM translocation system


Gene families : OG0010431 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra035826
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_151


Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003674 molecular_function IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003724 RNA helicase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003735 structural constituent of ribosome IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003743 translation initiation factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003924 GTPase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004055 argininosuccinate synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005488 binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006188 IMP biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006412 translation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006520 amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006525 arginine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006526 arginine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008131 primary amine oxidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008186 ATP-dependent activity, acting on RNA IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009064 glutamine family amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009123 nucleoside monophosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016842 amidine-lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030490 maturation of SSU-rRNA IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030515 snoRNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043226 organelle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043603 amide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046040 IMP metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0048038 quinone binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051020 GTPase binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR027246 Porin_Euk/Tom40 30 303
No external refs found!