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Aliases : PGIP1, ATPGIP1
Description : not classified
Gene families : OG0000757 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000757_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra002067 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_235 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bra009238 | PGIP2, ATPGIP2 | pathogen polygalacturonase inhibitor *(PGIP) | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003924 | GTPase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004568 | chitinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004601 | peroxidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004814 | arginine-tRNA ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004827 | proline-tRNA ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005525 | GTP binding | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005672 | transcription factor TFIIA complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005737 | cytoplasm | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005759 | mitochondrial matrix | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005811 | lipid droplet | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006030 | chitin metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006032 | chitin catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006040 | amino sugar metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006082 | organic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006399 | tRNA metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006420 | arginyl-tRNA aminoacylation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006433 | prolyl-tRNA aminoacylation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006520 | amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006979 | response to oxidative stress | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008061 | chitin binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0012511 | monolayer-surrounded lipid storage body | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016209 | antioxidant activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016787 | hydrolase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016874 | ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0017076 | purine nucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0030515 | snoRNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0032553 | ribonucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0036094 | small molecule binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042254 | ribosome biogenesis | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043038 | amino acid activation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0043167 | ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0043168 | anion binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0043233 | organelle lumen | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044281 | small molecule metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046348 | amino sugar catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071704 | organic substance metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |