Description : component *(uL18) of large ribosomal-subunit (LSU) proteome. metabolite transporter *(DTX)
Gene families : OG0001607 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001607_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa (Bra) PCC: Bra015131 | |
Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_20 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Spov3_chr5.03439 | RPL5B, OLI7 | component *(uL18) of large ribosomal-subunit (LSU) proteome | 0.12 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr6.00407 | RPL5B, OLI7 | component *(uL18) of large ribosomal-subunit (LSU) proteome | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
MF | GO:0008097 | 5S rRNA binding | IEA | Interproscan |
MF | GO:0015297 | antiporter activity | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEA | Interproscan |
BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003743 | translation initiation factor activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0004055 | argininosuccinate synthase activity | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0005737 | cytoplasm | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006525 | arginine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006526 | arginine biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0016571 | histone methylation | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0034968 | histone lysine methylation | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0042254 | ribosome biogenesis | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0045182 | translation regulator activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Brassica rapa GO terms from Neighborhoods |
No external refs found! |