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Aliases : SHM4
Description : EC_2.1 transferase transferring one-carbon group. serine hydroxymethyltransferase *(SHM)
Gene families : OG0006686 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra014001 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_175 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003674 | molecular_function | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003824 | catalytic activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003830 | beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003871 | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004427 | inorganic diphosphate phosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004489 | methylenetetrahydrofolate reductase (NAD(P)H) activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004779 | sulfate adenylyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004781 | sulfate adenylyltransferase (ATP) activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005315 | inorganic phosphate transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005875 | microtubule associated complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006082 | organic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006486 | protein glycosylation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006487 | protein N-linked glycosylation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006520 | amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006555 | methionine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006817 | phosphate ion transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008150 | biological_process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008168 | methyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008172 | S-methyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009086 | methionine biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010206 | photosystem II repair | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010207 | photosystem II assembly | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016491 | oxidoreductase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016740 | transferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016757 | glycosyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016758 | hexosyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016843 | amine-lyase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016844 | strictosidine synthase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0030091 | protein repair | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0030286 | dynein complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0042085 | 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043413 | macromolecule glycosylation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044238 | primary metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044281 | small molecule metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0070085 | glycosylation | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0070566 | adenylyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071704 | organic substance metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR039429 | SHMT-like_dom | 13 | 252 |
| No external refs found! |