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Aliases : IAN12
Description : E3 ubiquitin ligase component *(LTN1) of Ribosome-associated Quality Control (RQC) complex
Gene families : OG0059485 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Marchantia polymorpha (Mpo) PCC: Mp7g07340.1 | |
| Cluster | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_20 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000154 | rRNA modification | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0000166 | nucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0001510 | RNA methylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003674 | molecular_function | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004386 | helicase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005244 | voltage-gated monoatomic ion channel activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005247 | voltage-gated chloride channel activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005253 | monoatomic anion channel activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005254 | chloride channel activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005515 | protein binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005524 | ATP binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005856 | cytoskeleton | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005885 | Arp2/3 protein complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006325 | chromatin organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006338 | chromatin remodeling | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006397 | mRNA processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006820 | monoatomic anion transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006821 | chloride transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0007015 | actin filament organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0008064 | regulation of actin polymerization or depolymerization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0008150 | biological_process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008270 | zinc ion binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008308 | voltage-gated monoatomic anion channel activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0008380 | RNA splicing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008509 | monoatomic anion transmembrane transporter activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0010468 | regulation of gene expression | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0015108 | chloride transmembrane transporter activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0015629 | actin cytoskeleton | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016043 | cellular component organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016071 | mRNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016435 | rRNA (guanine) methyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016485 | protein processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016853 | isomerase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0017003 | protein-heme linkage | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0017004 | cytochrome complex assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0017006 | protein-tetrapyrrole linkage | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0017069 | snRNA binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0017070 | U6 snRNA binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0017076 | purine nucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019222 | regulation of metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0022607 | cellular component assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0022832 | voltage-gated channel activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0022836 | gated channel activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0022839 | monoatomic ion gated channel activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0030120 | vesicle coat | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0030127 | COPII vesicle coat | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0030623 | U5 snRNA binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0030832 | regulation of actin filament length | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0030833 | regulation of actin filament polymerization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0031167 | rRNA methylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0031491 | nucleosome binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0032271 | regulation of protein polymerization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0032535 | regulation of cellular component size | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0032553 | ribonucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0032956 | regulation of actin cytoskeleton organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0032970 | regulation of actin filament-based process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0033043 | regulation of organelle organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034314 | Arp2/3 complex-mediated actin nucleation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0036094 | small molecule binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0036265 | RNA (guanine-N7)-methylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0043167 | ion binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0043168 | anion binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043248 | proteasome assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043254 | regulation of protein-containing complex assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043414 | macromolecule methylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043933 | protein-containing complex organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044238 | primary metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0045010 | actin nucleation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0046914 | transition metal ion binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0050789 | regulation of biological process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0050794 | regulation of cellular process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0051493 | regulation of cytoskeleton organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0051604 | protein maturation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0060090 | molecular adaptor activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0065007 | biological regulation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0065008 | regulation of biological quality | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0070475 | rRNA base methylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0070476 | rRNA (guanine-N7)-methylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0071586 | CAAX-box protein processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0071704 | organic substance metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0071824 | protein-DNA complex organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0090066 | regulation of anatomical structure size | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0097435 | supramolecular fiber organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0110053 | regulation of actin filament organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0140657 | ATP-dependent activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1902903 | regulation of supramolecular fiber organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |