1. Home
  2. Species
  3. Spinacia oleracea
  4. Sequence
  5. Spov3_chr6.01454

Spov3_chr6.01454 (SDE1, AtRDR6, SGS2, RDR6)


Aliases : SDE1, AtRDR6, SGS2, RDR6

Description : ssRNA polymerase *(RDR6)


Gene families : OG0064678 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr6.01454
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_140


Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004175 endopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004222 metalloendopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006457 protein folding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008237 metallopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009308 amine metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009690 cytokinin metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010817 regulation of hormone levels IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016485 protein processing IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019139 cytokinin dehydrogenase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042445 hormone metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0044183 protein folding chaperone IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0050660 flavin adenine dinucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051020 GTPase binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051604 protein maturation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0065008 regulation of biological quality IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071586 CAAX-box protein processing IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140662 ATP-dependent protein folding chaperone IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR007855 RNA-dep_RNA_pol_euk-typ 419 1004
No external refs found!