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  5. Spov3_chr6.00094

Spov3_chr6.00094


Description : not classified


Gene families : OG0019529 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr6.00094
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_42


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003682 chromatin binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006914 autophagy IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008037 cell recognition IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008094 ATP-dependent activity, acting on DNA IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009891 positive regulation of biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009893 positive regulation of metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016409 palmitoyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0016459 myosin complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016485 protein processing IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0022804 active transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0030126 COPI vesicle coat IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031325 positive regulation of cellular metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0031491 nucleosome binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032784 regulation of DNA-templated transcription elongation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032786 positive regulation of DNA-templated transcription, elongation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032968 positive regulation of transcription elongation by RNA polymerase II IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034243 regulation of transcription elongation by RNA polymerase II IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035091 phosphatidylinositol binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0045893 positive regulation of DNA-templated transcription IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048518 positive regulation of biological process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048522 positive regulation of cellular process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048544 recognition of pollen IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051254 positive regulation of RNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051604 protein maturation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0061919 process utilizing autophagic mechanism IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071586 CAAX-box protein processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex organization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140097 catalytic activity, acting on DNA IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 250 421
IPR001650 Helicase_C 460 566
No external refs found!