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  5. Spov3_chr5.01123

Spov3_chr5.01123 (BIG2)


Aliases : BIG2

Description : ARF-GTPase guanyl-nucleotide exchange factor *(BIG)


Gene families : OG0002249 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002249_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr5.01123
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_4_38961.1 BIG2 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_7_7460.1 BIG2 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEA Interproscan
BP GO:0032012 regulation of ARF protein signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0000271 polysaccharide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004843 cysteine-type deubiquitinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005488 binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0005976 polysaccharide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009250 glucan biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016197 endosomal transport IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0016459 myosin complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016482 cytosolic transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016579 protein deubiquitination IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018208 peptidyl-proline modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019783 ubiquitin-like protein peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035251 UDP-glucosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042147 retrograde transport, endosome to Golgi IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043687 post-translational protein modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044042 glucan metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051273 beta-glucan metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051274 beta-glucan biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070646 protein modification by small protein removal IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070647 protein modification by small protein conjugation or removal IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0098797 plasma membrane protein complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR046455 Sec7/BIG1-like_C 1590 1786
IPR032629 DCB_dom 6 221
IPR000904 Sec7_dom 633 814
IPR032691 Mon2/Sec7/BIG1-like_HUS 361 519
IPR015403 Mon2/Sec7/BIG1-like_HDS 1180 1262
IPR032817 Mon2_C 1283 1429
No external refs found!