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  5. Bra010726

Bra010726


Description : not classified


Gene families : OG0030852 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra010726
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_210


Type GO Term Name Evidence Source
BP GO:0006621 protein retention in ER lumen IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0046923 ER retention sequence binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000491 small nucleolar ribonucleoprotein complex assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000492 box C/D snoRNP assembly IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004664 prephenate dehydratase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005681 spliceosomal complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005787 signal peptidase complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006099 tricarboxylic acid cycle IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006465 signal peptide processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006558 L-phenylalanine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009072 aromatic amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009094 L-phenylalanine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016485 protein processing IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016836 hydro-lyase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022618 protein-RNA complex assembly IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051604 protein maturation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071826 protein-RNA complex organization IEP Brassica rapa GO terms from Neighborhoods
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000133 ER_ret_rcpt 69 211
No external refs found!