Spov3_chr4.04827 (CCT5)

Aliases : CCT5

Description : subunit epsilon *(CCT5) of CCT chaperonin folding complex

Gene families : OG0009305 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr4.04827
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_130

Target	Alias	Description	ECC score	Gene Family Method	Actions
Lsat_1_v5_gn_4_2661.1	CCT5	subunit epsilon *(CCT5) of CCT chaperonin folding complex	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003676	nucleic acid binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003735	structural constituent of ribosome	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003743	translation initiation factor activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003746	translation elongation factor activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004379	glycylpeptide N-tetradecanoyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004576	oligosaccharyl transferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005198	structural molecule activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005575	cellular_component	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005643	nuclear pore	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005737	cytoplasm	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005741	mitochondrial outer membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005840	ribosome	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006325	chromatin organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006334	nucleosome assembly	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006338	chromatin remodeling	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006399	tRNA metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006412	translation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006413	translational initiation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006414	translational elongation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006518	peptide metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006520	amino acid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006807	nitrogen compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008097	5S rRNA binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008135	translation factor activity, RNA binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0008150	biological_process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0008152	metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009058	biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009059	macromolecule biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0009982	pseudouridine synthase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009987	cellular process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016410	N-acyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016874	ligase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019107	myristoyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019538	protein metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019843	rRNA binding	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0019867	outer membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019899	enzyme binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0031267	small GTPase binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0031369	translation initiation factor binding	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0031968	organelle outer membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0034660	ncRNA metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0034728	nucleosome organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043038	amino acid activation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043039	tRNA aminoacylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043043	peptide biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043170	macromolecule metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0043226	organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0043228	non-membrane-bounded organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0043229	intracellular organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043603	amide metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043604	amide biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044237	cellular metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044238	primary metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044249	cellular biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0045182	translation regulator activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046907	intracellular transport	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0051020	GTPase binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051641	cellular localization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051649	establishment of localization in cell	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0065004	protein-DNA complex assembly	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071704	organic substance metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071824	protein-DNA complex organization	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0098588	bounding membrane of organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0110165	cellular anatomical entity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901576	organic substance biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/GroEL/TCP-1	40	531

External Links

No external refs found!

Spov3_chr4.04827 (CCT5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation