Spov3_chr4.03842 (ATTAF6, TAF6, EMB2781, TAFII59)

Aliases : ATTAF6, TAF6, EMB2781, TAFII59

Description : component *(TAF6) of SAGA transcription co-activator complex

Gene families : OG0072667 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr4.03842
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_172

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006352	DNA-templated transcription initiation	None	Extended
BP	GO:0006367	transcription initiation at RNA polymerase II promoter	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000075	cell cycle checkpoint signaling	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004527	exonuclease activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005488	binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005515	protein binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006486	protein glycosylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0007088	regulation of mitotic nuclear division	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0007093	mitotic cell cycle checkpoint signaling	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0007094	mitotic spindle assembly checkpoint signaling	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0007346	regulation of mitotic cell cycle	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008092	cytoskeletal protein binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008408	3'-5' exonuclease activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010564	regulation of cell cycle process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010639	negative regulation of organelle organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010948	negative regulation of cell cycle process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010965	regulation of mitotic sister chromatid separation	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015299	obsolete solute:proton antiporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015631	tubulin binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019899	enzyme binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0022402	cell cycle process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0030071	regulation of mitotic metaphase/anaphase transition	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0030832	regulation of actin filament length	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0030833	regulation of actin filament polymerization	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0031267	small GTPase binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0031577	spindle checkpoint signaling	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0032271	regulation of protein polymerization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0032535	regulation of cellular component size	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0032970	regulation of actin filament-based process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0033043	regulation of organelle organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0033044	regulation of chromosome organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0033045	regulation of sister chromatid segregation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0033046	negative regulation of sister chromatid segregation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0033047	regulation of mitotic sister chromatid segregation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0033048	negative regulation of mitotic sister chromatid segregation	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0042887	amide transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0043015	gamma-tubulin binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043254	regulation of protein-containing complex assembly	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043413	macromolecule glycosylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0045786	negative regulation of cell cycle	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0045839	negative regulation of mitotic nuclear division	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0045841	negative regulation of mitotic metaphase/anaphase transition	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0045930	negative regulation of mitotic cell cycle	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0051020	GTPase binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051128	regulation of cellular component organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051129	negative regulation of cellular component organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051493	regulation of cytoskeleton organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051726	regulation of cell cycle	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051783	regulation of nuclear division	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051784	negative regulation of nuclear division	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051983	regulation of chromosome segregation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051985	negative regulation of chromosome segregation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0065008	regulation of biological quality	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0070085	glycosylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071173	spindle assembly checkpoint signaling	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071174	mitotic spindle checkpoint signaling	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0090066	regulation of anatomical structure size	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0110053	regulation of actin filament organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901987	regulation of cell cycle phase transition	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901988	negative regulation of cell cycle phase transition	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1901991	negative regulation of mitotic cell cycle phase transition	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1902099	regulation of metaphase/anaphase transition of cell cycle	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1902100	negative regulation of metaphase/anaphase transition of cell cycle	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1903047	mitotic cell cycle process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:1904680	peptide transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1905818	regulation of chromosome separation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:1905819	negative regulation of chromosome separation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:2000816	negative regulation of mitotic sister chromatid separation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:2001251	negative regulation of chromosome organization	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR004823	TAF_TATA-bd_Histone-like_dom	1	65
IPR011442	TAF6_C	261	356

External Links

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Spov3_chr4.03842 (ATTAF6, TAF6, EMB2781, TAFII59)

Expression Profile

Co-expression Networks

Functional Annotation