Coexpression cluster: Cluster_172 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043015 gamma-tubulin binding 2.99% (2/67) 7.7 3.6e-05 0.010903
GO:0003674 molecular_function 52.24% (35/67) 0.82 8.3e-05 0.01256
GO:0071173 spindle assembly checkpoint signaling 1.49% (1/67) 9.02 0.001921 0.021417
GO:0007093 mitotic cell cycle checkpoint signaling 1.49% (1/67) 9.02 0.001921 0.021417
GO:0051985 negative regulation of chromosome segregation 1.49% (1/67) 9.02 0.001921 0.021417
GO:0045839 negative regulation of mitotic nuclear division 1.49% (1/67) 9.02 0.001921 0.021417
GO:0045841 negative regulation of mitotic metaphase/anaphase transition 1.49% (1/67) 9.02 0.001921 0.021417
GO:0045930 negative regulation of mitotic cell cycle 1.49% (1/67) 9.02 0.001921 0.021417
GO:0051784 negative regulation of nuclear division 1.49% (1/67) 9.02 0.001921 0.021417
GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle 1.49% (1/67) 9.02 0.001921 0.021417
GO:1901991 negative regulation of mitotic cell cycle phase transition 1.49% (1/67) 9.02 0.001921 0.021417
GO:0071174 mitotic spindle checkpoint signaling 1.49% (1/67) 9.02 0.001921 0.021417
GO:1905819 negative regulation of chromosome separation 1.49% (1/67) 9.02 0.001921 0.021417
GO:2000816 negative regulation of mitotic sister chromatid separation 1.49% (1/67) 9.02 0.001921 0.021417
GO:0033048 negative regulation of mitotic sister chromatid segregation 1.49% (1/67) 9.02 0.001921 0.021417
GO:2001251 negative regulation of chromosome organization 1.49% (1/67) 9.02 0.001921 0.021417
GO:0033046 negative regulation of sister chromatid segregation 1.49% (1/67) 9.02 0.001921 0.021417
GO:0007094 mitotic spindle assembly checkpoint signaling 1.49% (1/67) 9.02 0.001921 0.021417
GO:0031577 spindle checkpoint signaling 1.49% (1/67) 9.02 0.001921 0.021417
GO:0003876 AMP deaminase activity 1.49% (1/67) 7.44 0.005753 0.03092
GO:0051129 negative regulation of cellular component organization 1.49% (1/67) 7.44 0.005753 0.03092
GO:0033044 regulation of chromosome organization 1.49% (1/67) 7.44 0.005753 0.03092
GO:0033045 regulation of sister chromatid segregation 1.49% (1/67) 7.44 0.005753 0.03092
GO:1902099 regulation of metaphase/anaphase transition of cell cycle 1.49% (1/67) 7.44 0.005753 0.03092
GO:0051983 regulation of chromosome segregation 1.49% (1/67) 7.44 0.005753 0.03092
GO:0106380 purine ribonucleotide salvage 1.49% (1/67) 7.44 0.005753 0.03092
GO:0032261 purine nucleotide salvage 1.49% (1/67) 7.44 0.005753 0.03092
GO:0047623 adenosine-phosphate deaminase activity 1.49% (1/67) 7.44 0.005753 0.03092
GO:0010639 negative regulation of organelle organization 1.49% (1/67) 7.44 0.005753 0.03092
GO:0007346 regulation of mitotic cell cycle 1.49% (1/67) 7.44 0.005753 0.03092
GO:0043173 nucleotide salvage 1.49% (1/67) 7.44 0.005753 0.03092
GO:0030071 regulation of mitotic metaphase/anaphase transition 1.49% (1/67) 7.44 0.005753 0.03092
GO:0032264 IMP salvage 1.49% (1/67) 7.44 0.005753 0.03092
GO:0043094 cellular metabolic compound salvage 1.49% (1/67) 7.44 0.005753 0.03092
GO:1901990 regulation of mitotic cell cycle phase transition 1.49% (1/67) 7.44 0.005753 0.03092
GO:0043101 purine-containing compound salvage 1.49% (1/67) 7.44 0.005753 0.03092
GO:0015631 tubulin binding 4.48% (3/67) 4.52 0.000311 0.031164
GO:0051783 regulation of nuclear division 1.49% (1/67) 8.02 0.003839 0.032095
GO:0006376 mRNA splice site recognition 1.49% (1/67) 8.02 0.003839 0.032095
GO:1905818 regulation of chromosome separation 1.49% (1/67) 8.02 0.003839 0.032095
GO:0005685 U1 snRNP 1.49% (1/67) 8.02 0.003839 0.032095
GO:0000469 obsolete cleavage involved in rRNA processing 1.49% (1/67) 8.02 0.003839 0.032095
GO:0010965 regulation of mitotic sister chromatid separation 1.49% (1/67) 8.02 0.003839 0.032095
GO:0007088 regulation of mitotic nuclear division 1.49% (1/67) 8.02 0.003839 0.032095
GO:0033047 regulation of mitotic sister chromatid segregation 1.49% (1/67) 8.02 0.003839 0.032095
GO:0016798 hydrolase activity, acting on glycosyl bonds 5.97% (4/67) 2.74 0.003058 0.032875
GO:0043170 macromolecule metabolic process 16.42% (11/67) 1.24 0.006252 0.033014
GO:0071704 organic substance metabolic process 22.39% (15/67) 1.27 0.001012 0.033862
GO:0003824 catalytic activity 31.34% (21/67) 1.01 0.000907 0.03411
GO:0006793 phosphorus metabolic process 8.96% (6/67) 1.78 0.007991 0.03436
GO:0006796 phosphate-containing compound metabolic process 8.96% (6/67) 1.78 0.007991 0.03436
GO:0010948 negative regulation of cell cycle process 1.49% (1/67) 7.02 0.007663 0.034425
GO:0120114 Sm-like protein family complex 1.49% (1/67) 7.02 0.007663 0.034425
GO:1901988 negative regulation of cell cycle phase transition 1.49% (1/67) 7.02 0.007663 0.034425
GO:0030532 small nuclear ribonucleoprotein complex 1.49% (1/67) 7.02 0.007663 0.034425
GO:0097525 spliceosomal snRNP complex 1.49% (1/67) 7.02 0.007663 0.034425
GO:0000075 cell cycle checkpoint signaling 1.49% (1/67) 7.02 0.007663 0.034425
GO:1903047 mitotic cell cycle process 1.49% (1/67) 7.02 0.007663 0.034425
GO:0045786 negative regulation of cell cycle 1.49% (1/67) 7.02 0.007663 0.034425
GO:0070647 protein modification by small protein conjugation or removal 2.99% (2/67) 3.92 0.007851 0.034751
GO:0140096 catalytic activity, acting on a protein 11.94% (8/67) 1.51 0.00686 0.035599
GO:0009167 purine ribonucleoside monophosphate metabolic process 1.49% (1/67) 6.44 0.011473 0.03635
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 1.49% (1/67) 6.44 0.011473 0.03635
GO:0033043 regulation of organelle organization 1.49% (1/67) 6.44 0.011473 0.03635
GO:1901987 regulation of cell cycle phase transition 1.49% (1/67) 6.44 0.011473 0.03635
GO:0009161 ribonucleoside monophosphate metabolic process 1.49% (1/67) 6.44 0.011473 0.03635
GO:0009127 purine nucleoside monophosphate biosynthetic process 1.49% (1/67) 6.44 0.011473 0.03635
GO:0019239 deaminase activity 1.49% (1/67) 6.44 0.011473 0.03635
GO:0009126 purine nucleoside monophosphate metabolic process 1.49% (1/67) 6.44 0.011473 0.03635
GO:0009124 nucleoside monophosphate biosynthetic process 1.49% (1/67) 6.44 0.011473 0.03635
GO:0009123 nucleoside monophosphate metabolic process 1.49% (1/67) 6.44 0.011473 0.03635
GO:0009156 ribonucleoside monophosphate biosynthetic process 1.49% (1/67) 6.44 0.011473 0.03635
GO:0003729 mRNA binding 1.49% (1/67) 6.44 0.011473 0.03635
GO:0003968 RNA-dependent RNA polymerase activity 1.49% (1/67) 6.44 0.011473 0.03635
GO:0009987 cellular process 20.9% (14/67) 1.1 0.004523 0.036799
GO:0008150 biological_process 31.34% (21/67) 1.02 0.000859 0.036938
GO:0046040 IMP metabolic process 1.49% (1/67) 6.7 0.009569 0.0379
GO:0022618 protein-RNA complex assembly 1.49% (1/67) 6.7 0.009569 0.0379
GO:0006188 IMP biosynthetic process 1.49% (1/67) 6.7 0.009569 0.0379
GO:0071826 protein-RNA complex organization 1.49% (1/67) 6.7 0.009569 0.0379
GO:0036211 protein modification process 8.96% (6/67) 1.74 0.008975 0.038051
GO:0005524 ATP binding 10.45% (7/67) 1.62 0.007593 0.038735
GO:0008092 cytoskeletal protein binding 4.48% (3/67) 4.07 0.000777 0.038988
GO:0016740 transferase activity 13.43% (9/67) 1.47 0.004965 0.03933
GO:0044237 cellular metabolic process 14.93% (10/67) 1.22 0.010069 0.03936
GO:0043167 ion binding 17.91% (12/67) 1.09 0.009445 0.039484
GO:0036094 small molecule binding 11.94% (8/67) 1.34 0.013384 0.039887
GO:0005488 binding 32.84% (22/67) 0.78 0.005172 0.039917
GO:0043168 anion binding 11.94% (8/67) 1.4 0.0105 0.040007
GO:0004525 ribonuclease III activity 1.49% (1/67) 6.22 0.013372 0.04025
GO:0032296 double-stranded RNA-specific ribonuclease activity 1.49% (1/67) 6.22 0.013372 0.04025
GO:0010564 regulation of cell cycle process 1.49% (1/67) 6.22 0.013372 0.04025
GO:0006367 transcription initiation at RNA polymerase II promoter 1.49% (1/67) 6.22 0.013372 0.04025
GO:0032559 adenyl ribonucleotide binding 10.45% (7/67) 1.53 0.01048 0.040442
GO:0006807 nitrogen compound metabolic process 16.42% (11/67) 1.12 0.011046 0.041047
GO:0043687 post-translational protein modification 2.99% (2/67) 3.67 0.010937 0.041151
GO:1901564 organonitrogen compound metabolic process 13.43% (9/67) 1.24 0.013151 0.041236
GO:0043412 macromolecule modification 8.96% (6/67) 1.67 0.011307 0.041505
GO:0000148 1,3-beta-D-glucan synthase complex 1.49% (1/67) 6.02 0.015268 0.041778
GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 1.49% (1/67) 6.02 0.015268 0.041778
GO:0000049 tRNA binding 1.49% (1/67) 6.02 0.015268 0.041778
GO:0006075 (1->3)-beta-D-glucan biosynthetic process 1.49% (1/67) 6.02 0.015268 0.041778
GO:0003843 1,3-beta-D-glucan synthase activity 1.49% (1/67) 6.02 0.015268 0.041778
GO:0006074 (1->3)-beta-D-glucan metabolic process 1.49% (1/67) 6.02 0.015268 0.041778
GO:0016787 hydrolase activity 14.93% (10/67) 1.12 0.015443 0.041878
GO:0035639 purine ribonucleoside triphosphate binding 10.45% (7/67) 1.44 0.014529 0.042876
GO:0030554 adenyl nucleotide binding 10.45% (7/67) 1.43 0.014692 0.042935
GO:0007165 signal transduction 2.99% (2/67) 3.42 0.015054 0.043569
GO:0008152 metabolic process 23.88% (16/67) 1.26 0.000733 0.044103
GO:0005515 protein binding 14.93% (10/67) 1.6 0.001551 0.046678
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_242 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_277 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_48 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_95 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_123 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_144 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_167 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_223 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_225 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_232 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_235 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Lactuca sativa Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm) Cluster_241 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_4 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_9 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_10 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_14 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_18 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_19 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_20 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_24 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_28 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_33 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_36 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_38 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_46 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_57 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_64 0.015 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_67 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_73 0.016 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_74 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_75 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_81 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_83 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_88 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_93 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_94 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_97 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_121 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_160 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_165 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_168 0.009 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_173 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_193 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_200 0.014 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_240 0.012 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_275 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Spinacia oleracea Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm) Cluster_427 0.013 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (67) (download table)

InterPro Domains

GO Terms

Family Terms