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  5. Spov3_chr3.04926

Spov3_chr3.04926 (Nup98a, DRA2)


Aliases : Nup98a, DRA2

Description : nucleoporin of nuclear pore complex *(NUP98)


Gene families : OG0009509 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.04926
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_1_64141.1 No alias not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
BP GO:0006913 nucleocytoplasmic transport IEA Interproscan
MF GO:0017056 structural constituent of nuclear pore IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0000166 nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003712 transcription coregulator activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003714 transcription corepressor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003724 RNA helicase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003951 NAD+ kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004175 endopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004176 ATP-dependent peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004222 metalloendopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004402 histone acetyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004470 malic enzyme activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005096 GTPase activator activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005488 binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006401 RNA catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006402 mRNA catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006473 protein acetylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006475 internal protein amino acid acetylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006739 NADP metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006741 NADP biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006906 vesicle fusion IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006914 autophagy IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0007030 Golgi organization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008047 enzyme activator activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008080 N-acetyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008186 ATP-dependent activity, acting on RNA IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008237 metallopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0008303 caspase complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008519 ammonium transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016050 vesicle organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016255 attachment of GPI anchor to protein IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016307 obsolete phosphatidylinositol phosphate kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016407 acetyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016410 N-acyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016570 histone modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016573 histone acetylation IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016615 malate dehydrogenase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016887 ATP hydrolysis activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018205 peptidyl-lysine modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018393 internal peptidyl-lysine acetylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018394 peptidyl-lysine acetylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019362 pyridine nucleotide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0034212 peptide N-acetyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0042393 histone binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0042765 GPI-anchor transamidase complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043543 protein acylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048284 organelle fusion IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0061024 membrane organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0061025 membrane fusion IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0061919 process utilizing autophagic mechanism IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072488 ammonium transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072524 pyridine-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0090174 organelle membrane fusion IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140993 histone modifying activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:1905369 endopeptidase complex IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR007230 Nup98_auto-Pept-S59_dom 831 977
No external refs found!