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  5. Spov3_chr3.04426

Spov3_chr3.04426 (ATVPS54, MTV17, VPS54)


Aliases : ATVPS54, MTV17, VPS54

Description : GARP-specific component *(VPS54) of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes


Gene families : OG0067665 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.04426
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_122


Type GO Term Name Evidence Source
BP GO:0042147 retrograde transport, endosome to Golgi IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003774 cytoskeletal motor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004843 cysteine-type deubiquitinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005488 binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006486 protein glycosylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009966 regulation of signal transduction IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010646 regulation of cell communication IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0016459 myosin complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016579 protein deubiquitination IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019783 ubiquitin-like protein peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0023051 regulation of signaling IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030234 enzyme regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030695 GTPase regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032012 regulation of ARF protein signal transduction IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035251 UDP-glucosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043413 macromolecule glycosylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046527 glucosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046578 regulation of Ras protein signal transduction IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048583 regulation of response to stimulus IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051020 GTPase binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070085 glycosylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070646 protein modification by small protein removal IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0098772 molecular function regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1902531 regulation of intracellular signal transduction IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012501 Vps54_C 779 931
No external refs found!